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Job DescriptionP76149
Confidence100.00%DateThu Jan 5 12:19:43 GMT 2012
Rank19Aligned Residues457
% Identity30%Templatec3qanB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:1-pyrroline-5-carboxylate dehydrogenase 1; PDBTitle: crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from2 bacillus halodurans
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ITPATHAISINPA. TGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGK
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Template Sequence  VTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGK
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   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   82.......90.........100.........110. ........120.........130.........140.........150.........160
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Query Sequence  PINQARAEVAKSANLCDWYAEHGPAMLKAE. PTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLK
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Template Sequence  PWKEADADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLK
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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   161........170.........180.........190.. .......200.........210.........220..... ....230...
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Query Sequence  HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNAD. NDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAG. . . . . . AALKKCVL
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Template Sequence  PASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIV
Template Known Secondary structure 

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   206...210.........220.........230.........240.........250.........260.........270.........280.....
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  ELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARF
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Template Sequence  EMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDE
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   286...290.........300.........310.........320.........330.........340.........350.........360.....
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  DLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGL
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Template Sequence  KAFEKIMSYIEIGKKEG. RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGL
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   366...370.........380.. .......390.........400.........410.........420.........430.........440....
 
   394.....400.........410.........420...... ...430.........440.. .......450.........460
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Query Sequence  SATIFTTDETQARQMAARLECGGVFINGYCASD. . ARVAFGGVKKSGFGRE. LSHFGLHEFCNIQTVWKD
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Template Sequence  TGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM
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   445....450.........460.........470.........480.........490.........500.........510....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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