Job Description P76149 Confidence 100.00% Date Thu Jan 5 12:19:43 GMT 2012 Rank 33 Aligned Residues 445 % Identity 32% Template c3pqaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactaldehyde dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661 Resolution 1.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	I	N	P	A	T	G	E	Q	L	S	V	L	P	W	A	G	A	D	D	I	E	N	A	L	Q	L	A	A	A	G	F	R	D	W	R	E	T	N	I	D	Y	R	A	E	K	L	R	D	I	G	K	A	L	R	A	R	S	E	E	M	A	Q	M	I	T	R	E	M	G	K	P	I	N	Q	A	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	V	I	N	P	Y	S	L	E	V	I	K	K	I	P	A	L	S	R	E	E	A	K	E	A	I	D	T	A	E	K	Y	K	E	V	M	K	N	L	P	I	T	K	R	Y	N	I	L	M	N	I	A	K	Q	I	K	E	K	K	E	E	L	A	K	I	L	A	I	D	A	G	K	P	I	K	Q	A	R	V
Template Known Secondary structure							T	T	T																									T						T																				T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	K	S	A	N	L	C	D	W	Y	A	E	H	G	P	A	M	L	K	A	E	P	T	L	V	E	N	Q	Q	A	V	I	E	Y	R	P	L	G	T	I	L	A	I	M	P	W	N	F	P	L	W	Q	V	M	R	G	A	V	P	I	I	L	A	G	N	G	Y	L	L	K	H	A	P	N	V	M	G	C
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		E	V	E	R	S	I	G	T	F	K	L	A	A	F	Y	V	K	E	H	.	R	D	E	V	I	P	S	D	D	R	L	I	F	T	R	R	E	P	V	G	I	V	G	A	I	T	P	F	N	F	P	L	N	L	S	A	H	K	I	A	P	A	I	A	T	G	N	V	I	V	H	H	P	S	S	K	A	P	L	V
Template Known Secondary structure																					.								T	T											S								S	S	S															T	T									T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		169	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure													.	.	.	.															.
Query SS confidence													.	.	.	.															.
Query Sequence		A	Q	L	I	A	Q	V	F	K	D	A	.	.	.	.	G	I	P	Q	G	V	Y	G	W	L	N	A	D	N	.	D	G	V	S	Q	M	I	K	D	S	R	I	A	A	V	T	V	T	G	S	V	R	A	G	A	A	I	G	A	Q	A	G	A	A	L	K	K	C	V	L	E	L	G	G	S	D	P	F	I	V
Query Conservation													.	.	.	.															.
Alig confidence													.	.	.	.															.																															.	.
Template Conservation																																																														.	.
Template Sequence		C	I	E	L	A	K	I	I	E	N	A	L	K	K	Y	N	V	P	L	G	V	Y	N	L	L	T	G	A	G	E	V	V	G	D	E	I	V	V	N	E	K	V	N	M	I	S	F	T	G	S	S	K	V	G	E	L	I	T	K	K	.	.	A	G	F	K	K	I	A	L	E	L	G	G	V	N	P	N	I	V
Template Known Secondary structure																T	T			G	G	G						S		T	T	T									T	T								S												.	.			S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	A	D	L	E	L	A	V	K	A	A	V	A	G	R	Y	Q	N	T	G	Q	V	C	A	A	A	K	R	F	I	I	E	E	G	I	A	S	A	F	T	E	R	F	V	A	A	A	A	A	L	K	M	G	D	P	R	D	E	E	N	A	L	G	P	M	A	R	F	D	L	R	D	E	L	H	H	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	D	A	D	L	N	K	A	V	N	A	L	I	K	G	S	F	I	Y	A	G	Q	V	C	I	S	V	G	M	I	L	V	D	E	S	I	A	D	K	F	I	E	M	F	V	N	K	A	K	V	L	N	V	G	N	P	L	D	E	K	T	D	V	G	P	L	I	S	V	E	H	A	E	W	V	E	K	V	V
Template Known Secondary structure			T	T	S															G	G	G	G		S	T	T	S								G	G	G														T			B	S		T	T	S	T	T		S	B				S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	T	L	A	Q	G	A	R	L	L	L	G	G	E	K	M	A	G	A	G	N	Y	Y	P	P	T	V	L	A	N	V	T	P	E	M	T	A	F	R	E	E	M	F	G	P	V	A	A	I	T	I	A	K	D	A	E	H	A	L	E	L	A	N	D	S	E	F	G	L	S	A	T	I	F	T	T	D	E	T
Query Conservation
Alig confidence															.	.	.														.																										.
Template Conservation															.	.	.														.																										.
Template Sequence		E	K	A	I	D	E	G	G	K	L	L	L	G	.	.	.	G	K	R	D	K	A	L	F	Y	P	T	I	L	.	E	V	D	R	D	N	I	L	C	K	T	E	T	F	A	P	V	I	P	I	I	R	T	N	E	.	E	E	M	I	D	I	A	N	S	T	E	Y	G	L	H	S	A	I	F	T	N	D	I	N
Template Known Secondary structure							T	T							.	.	.					T	T								.				T	T	S	G	G	G	T					S	S										.								T		S	S			S							S
Template Predicted Secondary structure															.	.	.														.																										.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.				.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		Q	A	R	Q	M	A	A	R	L	E	C	G	G	V	F	I	N	G	Y	C	A	S	D	.	A	R	V	A	F	G	G	V	K	K	S	G	F	G	R	E	L	S	H	F	G	L	H	E	F	C	N	I	Q	T	V	W	K	D	R
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		K	S	L	K	F	A	E	N	L	E	F	G	G	V	V	I	N	D	S	S	L	F	R	Q	D	N	M	P	F	G	G	V	K	K	S	G	L	G	R	E	G	V	K	Y	A	M	E	E	M	S	N	I	K	T	I	I	I	S	K
Template Known Secondary structure										S		S	S					S	S		T	T				T	T	S		B			S	G	G	G			S		B	S								T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.