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Job DescriptionP76149
Confidence100.00%DateThu Jan 5 12:19:43 GMT 2012
Rank39Aligned Residues423
% Identity23%Templatec3lnsD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:benzaldehyde dehydrogenase; PDBTitle: benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with2 bound nadp+ and benzoate adduct
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80....... ..90.........100...
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Query Sequence  WAGADDIENALQLAAAGFRDWRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPINQAR. AEVAKSANLCDWYAEH
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Template Conservation    
   
  
   
  
   
       
   
      
      
      
 

    
   

      
      
Template Sequence  YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH
Template Known Secondary structure 


TTTT
STT


T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   104.....110. ........120.........130.........140.........150.........160.........170.........
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Query Sequence  GPAMLKAE. . . . PTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDA
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Template Sequence  LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA
Template Known Secondary structure  TS



GGG
S




SSSTTTT


TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  GIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAG
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Template Sequence  FAPEYV. AVIQGGRDENSHLLSLP. FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFG
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TTT.



TS
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TTT






TT

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   163..... .170.........180..... ....190.........200.........210.........220.........230.........240
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  RYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEK
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Template Sequence  KFINSGQ. TIAPDYLYVHYSVKDALLERLVERVKTE. . . . . LPEINSTGKLVTERQVQRLVSLLEAT. . . QGQVLVGSQA
Template Known Secondary structure  GGGG
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   241...... ..250.........260.........270..... ....280.........290.........300. ........310.
 
   340.........350.........360.........370.........380........ .390.........400.........410........
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Query Sequence  MAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELAND. SEFGLSATIFTTDETQARQMAARLECGGVF
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Template Sequence  . DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ
Template Known Secondary structure  .GGGT

S

TTSGGGSS


SSS
S
S
S
S
TS

S
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   313......320.........330.........340.........350.........360.........370.........380.........390.
 
   419420..... ....430.........440.........450.........
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Query Sequence  INGYCAS. . DARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWK
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Template Sequence  VNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI
Template Known Secondary structure  S

SGGGG
TTS
B


GGG

BST
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   392.......400.........410.........420.........430....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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