Job Description P76149 Confidence 100.00% Date Thu Jan 5 12:19:43 GMT 2012 Rank 41 Aligned Residues 413 % Identity 18% Template c3k9dD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of probable aldehyde dehydrogenase from listeria2 monocytogenes egd-e Resolution 2.00 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	D	I	E	N	A	L	Q	L	A	A	A	G	F	R	D	W	R	E	T	N	I	D	Y	R	A	E	K	L	R	D	I	G	K	A	L	R	A	R	S	E	E	M	A	Q	M	I	T	R	E	M	G	K	P	I	N	Q	A	R	A	E	V	A	K	S	A	N	L	C	D	W	Y	A	E	H	G	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	Q	E	V	R	N	L	I	E	S	A	N	K	A	Q	K	E	L	A	A	M	S	Q	Q	Q	I	D	T	I	V	K	A	I	A	D	A	G	Y	G	A	R	E	K	L	A	K	M	A	H	E	E	T	G	F	G	I	W	Q	D	K	V	I	K	N	V	F	A	S	K	H	V	Y	N	Y	I	K	D	M	K
Template Known Secondary structure																					S	S																				T															S																					T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		M	L	K	A	E	P	T	L	V	E	N	Q	Q	A	V	I	E	Y	R	P	L	G	T	I	L	A	I	M	P	W	N	F	P	L	W	Q	V	M	R	G	A	V	P	I	I	L	A	G	N	G	Y	L	L	K	H	A	P	N	V	M	G	C	A	Q	L	I	A	Q	V	.	.	.	.	F	K	D	A	G	I	P
Query Conservation																																																																							.	.	.	.
Alig confidence					.																																																																		.	.	.	.
Template Conservation					.
Template Sequence		T	I	G	.	M	L	K	E	D	N	E	K	K	V	M	E	V	A	V	P	L	G	V	V	A	G	L	I	P	S	T	N	P	T	S	T	V	I	Y	K	T	L	I	S	I	K	A	G	N	S	I	V	F	S	P	H	P	N	A	L	K	A	I	L	E	T	V	R	I	I	S	E	A	A	E	K	A	G	C	P
Template Known Secondary structure			S		.						T	T	T	T																	S	S	S															T	T									G	G	G																			T
Template Predicted Secondary structure					.
Template SS confidence
		90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		Q	G	V	Y	G	W	L	N	A	D	N	.	D	G	V	S	Q	M	I	K	D	S	R	I	A	A	V	T	V	T	G	S	V	R	A	G	A	A	I	G	A	Q	A	G	A	A	L	K	K	C	V	L	E	L	G	G	S	D	P	F	I	V	L	N	D	A	D	L	E	L	A	V	K	A	A	V	A	G	R	Y
Query Conservation													.
Alig confidence													.																														.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		K	G	A	I	S	C	M	T	V	P	T	I	Q	G	T	D	Q	L	M	K	H	K	D	T	A	V	I	L	A	T	G	G	S	A	M	V	K	A	A	Y	S	.	.	.	.	S	G	T	P	A	I	G	V	G	P	G	N	G	P	A	F	I	E	R	S	A	N	I	P	R	A	V	K	H	I	L	D	S	K	T
Template Known Secondary structure		T	T	S					S	S													T	T								S										T	.	.	.	.	S	S	S					B											T	T	S														T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300									.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		Q	N	T	G	Q	V	C	A	A	A	K	R	F	I	I	E	E	G	I	A	S	A	F	T	E	R	F	V	A	A	A	A	A	L	K	M	G	D	P	.	.	.	.	.	.	.	.	R	D	E	E	N	A	L	G	P	M	A	R	F	D	L	R	D	E	L	H	H	Q	V	E	K	T	L	A	Q	G	A	R	L
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	N	G	T	I	C	A	S	E	Q	S	V	V	V	E	R	V	N	K	E	A	V	I	A	E	F	R	K	Q	G	A	H	F	L	S	D	A	E	A	V	Q	L	G	K	F	I	L	R	P	N	G	S	M	N	P	A	I	V	G	K	S	V	Q	H	I	A	N	L	A	G	L	T	V	P	A	D	A	R	V
Template Known Secondary structure		G	G	G	G	T	S	T	T	S								T	T	T											T	T																	B		T	T	S		B		T	T	T	T	T											T					T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		L	L	G	G	E	K	M	A	G	A	G	N	Y	Y	P	P	T	V	L	A	N	V	T	P	E	M	T	A	F	R	E	E	M	F	G	P	V	A	A	I	T	I	A	K	D	A	E	H	A	L	E	L	A	N	D	S	E	F	.	.	.	.	G	L	S	A	T	I	F	T	T	D	E	T	Q	A	R	Q	M	A
Query Conservation																																																												.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	A	E	E	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	A	K	I	P	Y	S	R	E	K	L	A	P	I	L	A	F	Y	T	A	E	T	W	Q	E	A	C	E	L	S	M	D	I	L	Y	H	E	G	A	G	H	T	L	I	I	H	S	E	D	K	E	I	I	R	E	F	A
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S		T	T	T	S				S	S								S	S													T	T	T	T	T	T	S							S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.																.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.						.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.											.	.									.	.	.	.	.
Query SS confidence																				.											.	.									.	.	.	.	.
Query Sequence		A	R	L	E	C	G	G	V	F	I	N	G	Y	C	A	S	D	A	.	R	V	A	F	G	G	V	K	K	S	.	.	G	F	G	R	E	L	S	H	.	.	.	.	.	F	G	L	H	E	F	C	N	I	Q	T	V	W	K
Query Conservation																				.											.	.									.	.	.	.	.
Alig confidence																				.											.	.									.	.	.	.	.
Template Conservation
Template Sequence		L	K	K	P	V	S	R	L	L	V	N	T	P	G	A	L	G	G	I	G	A	T	T	N	L	V	P	A	L	T	L	G	C	G	A	V	G	G	S	S	S	S	D	N	I	G	P	E	N	L	F	N	I	R	R	I	A	T
Template Known Secondary structure					S		S					S	S							T	T	S	S	S	S	S				S		B	B		T	G	G	G	T		S			S	B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.