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Job DescriptionP76149
Confidence100.00%DateThu Jan 5 12:19:43 GMT 2012
Rank32Aligned Residues450
% Identity24%Templatec3ju8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:succinylglutamic semialdehyde dehydrogenase; PDBTitle: crystal structure of succinylglutamic semialdehyde dehydrogenase from2 pseudomonas aeruginosa.
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  AISINPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPINQARA
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Template Sequence  LESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESAT
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TTT




S
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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGC
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Template Sequence  EVTSXVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV
Template Known Secondary structure  S

TT
S

SSSTTT


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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   169170.........180.........190.........200.........210.........220..... ....230.........240.......
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Query Sequence  AQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAG. AALKKCVLELGGSDPFIVLNDA
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Template Sequence  AELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVA
Template Known Secondary structure  TT

TTS


ST
TT
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TT
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S
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   248.250.........260.........270.........280. ........290.........300 .........310.........320.....
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Query Sequence  DLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA. SAFTERFVAAAAALKMGDP. RDEENALGPMARFDLRDELHHQVEK
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Template Conservation 

  

  

       

 
 
   
 
      
     
      
  
          
  
              
Template Sequence  DLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEH
Template Known Secondary structure 
TGGGG
STT
SSTT

B

TT
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S
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  TLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFTTDETQA
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Template Sequence  LIGKGAQPLLAXTQPIDGAALLTPGIL. DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERF
Template Known Secondary structure  TT





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   339340.........350.........360..... ....370.........380.........390.........400.........410.......
 
   406...410.........420.... .....430.........440.........450.........
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Query Sequence  RQMAARLECGGVFINGYCA. SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWK
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Template Sequence  EQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVASLE
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SSSS
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TTS


GGGBSS

TT
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   418.420.........430.........440.........450.........460.........470..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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