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Job DescriptionP76149
Confidence100.00%DateThu Jan 5 12:19:43 GMT 2012
Rank35Aligned Residues455
% Identity21%Templatec2vroB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  TPATHAISINPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPI
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Template Sequence  GTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTR
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SSS

TTT



TT

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T


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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   84.....90.........100.........110 .........120.........130.........140.........150...
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Query Sequence  NQARAEVAKSANLCDWYAEHGPAMLKA. . . . . . . . . . EPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILA
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Template Sequence  NDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS
Template Known Secondary structure  TT
S
S
STTS

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TT
TTT
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   154.....160.........170.... .....180.........190.........200.........210.........220..... ....230
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Query Sequence  GNGYLLKHAPNVMGCAQLIAQ. VFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAG. . AALKK
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Template Sequence  GVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG. . LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGAR
Template Known Secondary structure  T



GGGT
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S

TT..TGGG

TT
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   176...180.........190.........200.........210........ .220.........230.........240.........250...
 
   231........240........ .250.........260.........270.........280.........290.........300.....
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Query Sequence  CVLELGGSDPFIVLNDAD. . . . . LELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEEN
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Template Sequence  LNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV
Template Known Secondary structure 




TT

TTSGGGG

TT
GGGTT

BB
TTSTT
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   254.....260.........270.........280.........290.........300.........310.........320.........330...
 
   306...310.........320.........330......... 340.........350.. .......360.........370.......
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Query Sequence  ALGPMARFDLRDELHHQVEKTLAQGARLLLGGEK. . . . . MAGAGNYYPPTVL. . ANVTPEMTAFREEMFGPVAAITIAK.
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Template Sequence  RMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRV
Template Known Secondary structure  SB


S
TTS
TTS

BSS
TTTS





S
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SSTTT



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   334.....340.........350.........360.........370.........380.........390.........400.........410...
 
   378.380.........390.........400.........410.........420..... ....430.........440...
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Query Sequence  . . . DAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCAS. . . . . . . . . . . DARVAFGGVKKSGFGREL
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Template Sequence  TALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEEL
Template Known Secondary structure 


TTTTSS
S
TTT
GGGTTT


SS


TTS

SGGG
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   414.....420.........430.........440.........450.........460.........470.........480.........490...
 
   444 .....450.........460
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Query Sequence  S. HFGLHEFCNIQTVWKD
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Template Conservation 
    
        
   
Template Sequence  GGLRALAFYHRRSAIQAA
Template Known Secondary structure  SGGGGGGGG
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   498.500.........510.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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