Job Description P76149 Confidence 100.00% Date Thu Jan 5 12:19:43 GMT 2012 Rank 4 Aligned Residues 459 % Identity 26% Template c2jg7G_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity Resolution 2.83 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	A	T	H	A	I	S	I	N	P	A	T	G	E	Q	L	S	V	L	P	W	A	G	A	D	D	I	E	N	A	L	Q	L	A	A	A	G	F	R	D	W	R	E	T	N	I	D	Y	R	A	E	K	L	R	D	I	G	K	A	L	R	A	R	S	E	E	M	A	Q	M	I	T	R	E	M	G	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	S	G	E	V	I	T	S	Y	C	P	A	N	N	E	P	I	A	R	V	T	Q	A	T	L	A	E	Y	E	E	T	V	Q	K	T	R	E	A	W	K	M	W	A	D	I	P	A	P	K	R	G	E	I	V	R	Q	I	G	D	A	L	R	K	K	I	K	V	L	G	S	L	V	S	L	E	M	G	K	I
Template Known Secondary structure					S								T	T	T	T																													T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		I	N	Q	A	R	A	E	V	A	K	S	A	N	L	C	D	W	Y	A	E	H	G	P	A	M	L	K	A	E	.	P	T	L	V	E	N	Q	Q	A	V	I	E	Y	R	P	L	G	T	I	L	A	I	M	P	W	N	F	P	L	W	Q	V	M	R	G	A	V	P	I	I	L	A	G	N	G	Y	L	L	K	H
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		Y	V	E	G	V	G	E	V	Q	E	Y	V	D	V	C	D	Y	A	V	G	L	S	R	M	I	G	G	P	V	L	P	S	E	R	P	G	H	A	L	I	E	Q	W	N	P	V	G	L	V	G	I	I	T	A	F	N	F	P	V	A	V	Y	G	W	N	N	A	I	A	L	T	C	G	N	V	C	L	W	K	G
Template Known Secondary structure																							T	T	T									S	S	T	T											S								S	S	S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		A	P	N	V	M	G	C	A	Q	L	I	A	Q	V	F	K	D	A	.	.	.	.	G	I	P	Q	G	V	Y	G	W	L	N	A	D	N	D	G	V	S	Q	M	I	K	D	S	R	I	A	A	V	T	V	T	G	S	V	R	A	G	A	A	I	G	A	Q	A	G	A	A	L	K	K	C	V	L	E	L	G	G
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		A	P	T	T	P	L	T	S	V	A	V	T	K	I	V	A	E	V	L	E	Q	N	N	L	P	G	A	I	C	S	M	T	C	G	G	A	D	I	G	T	A	M	A	K	D	E	R	V	D	L	L	S	F	T	G	S	T	H	V	G	K	M	V	A	M	M	V	Q	E	R	F	G	R	K	L	L	E	L	G	G
Template Known Secondary structure			T	T																			T	T			G	G	G							S											T	T		S						S															T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	P	F	I	V	L	N	D	A	D	L	E	L	A	V	K	A	A	V	A	G	R	Y	Q	N	T	G	Q	V	C	A	A	A	K	R	F	I	I	E	E	G	I	A	S	A	F	T	E	R	F	V	A	A	A	A	A	L	K	M	G	D	P	R	D	E	E	N	A	L	G	P	M	A	R	F	D	L	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	A	I	I	V	F	E	D	A	D	L	N	L	V	V	P	S	A	V	F	A	S	V	G	T	A	G	Q	R	C	T	T	T	R	R	L	M	L	H	E	S	V	H	D	A	V	V	E	R	I	A	K	A	Y	K	Q	V	R	I	G	D	P	W	D	P	S	T	L	Y	G	P	L	H	T	K	Q	A	V	D
Template Known Secondary structure									T	T	S															G	G	G	G		S	T	T									T	T	T													T	T			B			T	T	S	T	T		S	B				S	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	H	Q	V	E	K	T	L	A	Q	G	A	R	L	L	L	G	G	E	K	M	A	G	A	G	N	Y	Y	P	P	T	V	L	A	N	V	T	P	E	M	T	A	F	R	E	E	M	F	G	P	V	A	A	I	T	I	A	K	D	A	E	H	A	L	E	L	A	N	D	S	E	F	G	L	S	A	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	L	A	A	I	E	Q	A	K	Q	Q	G	G	T	L	V	C	G	G	K	V	M	D	R	P	G	N	Y	V	E	P	T	I	I	T	G	L	A	H	D	A	P	I	V	H	T	E	T	F	V	P	I	L	Y	V	L	K	F	K	T	E	E	E	A	F	A	W	N	N	E	V	Q	Q	G	L	S	S	S	I
Template Known Secondary structure													T	T								S	B		S	S	S	S	S		B										T	T						S				S	S																				S	S			S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		398	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure													.	.																	.
Query SS confidence													.	.																	.
Query Sequence		F	T	T	D	E	T	Q	A	R	Q	M	.	.	A	A	R	L	E	C	G	G	V	F	I	N	G	Y	C	A	.	S	D	A	R	V	A	F	G	G	V	K	K	S	G	F	G	R	E	L	S	H	F	G	L	H	E	F	C	N	I	Q	T	V	W	K	D	R
Query Conservation													.	.																	.
Alig confidence													.	.																	.
Template Conservation
Template Sequence		F	T	K	D	L	G	R	V	F	R	W	L	G	P	K	G	S	D	C	G	I	V	N	V	N	I	P	T	S	G	A	E	I	G	G	A	F	G	G	E	K	H	T	G	G	G	R	E	S	G	S	D	S	W	K	Q	Y	M	R	R	S	T	C	T	I	N	Y
Template Known Secondary structure														S	T	T	S			S	S					S	S		T	T				T	T	S					S	G	G	G		S					S	T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.