Job Description P42624 Confidence 96.57% Date Thu Jan 5 12:01:54 GMT 2012 Rank 60 Aligned Residues 198 % Identity 14% Template c3kscD_ PDB info PDB header:plant protein Chain: D: PDB Molecule:lega class; PDBTitle: crystal structure of pea prolegumin, an 11s seed globulin2 from pisum sativum l. Resolution 2.61 Å

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		28	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.										.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure												.	.	.																																							.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																							.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	F	D	P	K	L	L	G	Y	.	.	.	A	S	L	R	V	L	N	Q	E	V	L	A	P	G	A	A	F	Q	P	R	T	Y	P	K	V	D	I	L	N	V	I	L	D	G	E	A	E	Y	.	.	.	.	.	.	.	.	.	R	D	S	E	G	N	H	V	Q	A	S	A	G	E	A	L	L	L	S	T
Query Conservation												.	.	.																																							.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.		.	.																		.																		.	.	.	.	.	.	.	.	.
Template Conservation																.	.																		.
Template Sequence		E	T	W	N	P	N	N	K	Q	F	R	C	A	G	.	.	V	A	L	S	R	A	T	L	Q	R	N	A	L	R	R	P	Y	.	Y	S	N	A	P	Q	E	I	F	I	Q	Q	G	N	G	Y	F	G	M	V	F	P	G	C	P	E	T	D	R	H	Q	K	V	N	R	F	R	E	G	D	I	I	A	V	P	T
Template Known Secondary structure						T	T	S							T	.	.										T	T							.			S	S																		T	T															T	T							T
Template Predicted Secondary structure																.	.																		.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	G	V	S	Y	S	E	H	N	L	S	K	D	K	P	L	T	R	M	Q	L	W	L	D	A	C	P	Q	R	E	N	P	L	I	Q	K	L	A	L	N	M	G	K	Q	Q	L	I	A	S	P	E	G	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		G	I	.	.	V	F	W	M	Y	N	D	Q	D	T	P	V	I	A	V	S	L	T	D	I	R	S	S	N	N	Q	L	D	Q	M	P	R	R	F	Y	L	A	G	N	H	E	Q	E	F	L	Q	Y	Q	H	E	G	N	N	I	F	S	G	F	K	R	D	F	L	E	D	A	F	N	V	N	R	H	I	V	D	R
Template Known Secondary structure		T		.	.								S	S	S										T	T	S	T	T			S		S	S						S	S	S	S				T	T	G	G	G						S	G	G	G	G	S										T
Template Predicted Secondary structure				.	.
Template SS confidence
		125	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
																																																												152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Q	L	R	Q	Q	V	W	L	H	H	I	V	L	D	K	G	E	S	A	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	G	R	N	E	D	E	E	K	G	A	I	V	K	V	K	G	G	L	S	I	I	T	V	C	T	A	K	L	R	L	N	I	G	P	S	S	S	P	D	I	Y	N	P	E	A	G	R	I	K	T	V	T	S	L	D	L	P	V	L	R	W	L	K	L	S	A	E	H	G	S	L	H	K	N	A	M	F	V
Template Known Secondary structure			T	T	T	T			T	T	T		S					S	S								S	S	S							S	T	T	S			S				T	T	T								T	T	T		T	T					T										T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		174	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230
Predicted Secondary structure					.																							.	.	.	.	.																										.
Query SS confidence					.																							.	.	.	.	.																										.
Query Sequence		F	Q	L	.	H	G	P	R	A	Y	L	Q	S	I	H	G	K	F	H	A	L	T	H	H	E	E	.	.	.	.	.	K	A	A	L	T	C	G	D	G	A	F	I	R	D	E	A	N	I	T	L	V	A	D	S	P	.	L	R	A	L	L	I	D
Query Conservation					.																							.	.	.	.	.																										.
Alig confidence					.																							.	.	.	.	.																										.
Template Conservation
Template Sequence		P	H	Y	N	L	N	A	N	S	I	I	Y	A	L	K	G	R	A	R	L	Q	V	V	N	C	N	G	N	T	V	F	D	G	E	L	E	A	G	R	A	L	T	V	P	Q	N	Y	A	V	A	A	K	S	L	S	D	R	F	S	Y	V	A	F	K
Template Known Secondary structure						S	S										S									T	T	S										T	T							T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions