60 c3kscD_ Probab=96.57   E-value=0.053  Score=31.08  Aligned_columns=198  Identities=14%

Q ss_pred             CCCCCCCCCC---CEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEE---------EECCCCEEEECCCCEEEEEC
Q ss_conf             5567432588---60599960173688735898769704999997017996---------41578814975883899954
Q batch____        28 HYFDPKLLGY---ASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEY---------RDSEGNHVQASAGEALLLST   95 (233)
Q Consensus        28 ~y~dp~~~~f---g~Lrv~ndd~i~pg~Gf~~HPHrg~eivTyvl~G~l~H---------~DS~Gn~~~i~~Gdvq~MsA   95 (233)
                      +++|++...|   |  ..+..-+|.|+.-+-+| |.+-+-+.||++|...-         .|..-....++.|||-.+-|
T Consensus        25 e~~~~~~~~l~caG--v~~~R~~i~P~gl~lP~-~~~A~~i~yV~qG~g~~g~v~pGc~et~~~~k~~~l~~GDV~~iPa  101 (376)
T c3kscD_          25 ETWNPNNKQFRCAG--VALSRATLQRNALRRPY-YSNAPQEIFIQQGNGYFGMVFPGCPETDRHQKVNRFREGDIIAVPT  101 (376)
T ss_dssp             EECCTTSHHHHHHT--CEEEEEEECTTEEEEEE-EESSCEEEEEEECEEEEEEECTTCCCCCCCCCEEEEETTEEEEECT
T ss_pred             EEECCCCCCCCCCC--EEEEEEEECCCCEECCC-CCCCCEEEEEEECEEEEEEEECCCCCCCCCEEEEEECCCCEEEECC
T ss_conf             99658876411068--36899885278531461-1586758999805399999817887775403788733785899889


Q ss_pred             CCCEEEEEECCCCCCCEEEEEEEECCHHHCCCCCCEEEECCCCCEEEEECCCCCCC------------------------
Q ss_conf             89648887347888608999987461341899864024157776899842677667------------------------
Q batch____        96 QPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGAMG------------------------  151 (233)
Q Consensus        96 G~Gi~HsE~n~~~~~~~~~lQiWi~p~~~~~~P~y~~~~~~~~~~~~i~~~~~~~~------------------------  151 (233)
                      |+  .|--+|.+....+-+.=+=+.-..-...+.|+..-+..+...-.........                        
T Consensus       102 G~--~~~~~N~g~~~~~~i~~~d~~n~~nqld~~~~~F~l~G~~~~~~~~~~~~~~~~~~gFs~~~La~Af~v~~~~~~k  179 (376)
T c3kscD_         102 GI--VFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHEGNNIFSGFKRDFLEDAFNVNRHIVDR  179 (376)
T ss_dssp             TC--EEEEEECSSSCEEEEEEECTTSTTCCSCSSCCEEESSSSCCCTTGGGCCCCCSGGGGSCHHHHHHHHTCCHHHHHH
T ss_pred             CC--EEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCHHHHHH
T ss_conf             86--7999975988589999962367765566651478961786421112345644331045989989883999999998


Q ss_pred             ----------------------------------------------------------CEEECCCCEEEEEEECCCCEEE
Q ss_conf             ----------------------------------------------------------5770177079999988997799
Q batch____       152 ----------------------------------------------------------SLQLRQQVWLHHIVLDKGESAN  173 (233)
Q Consensus       152 ----------------------------------------------------------~~~~~~~~~~~~~~l~~g~~~~  173 (233)
                                                                                |.--..++.+..+.|.+|+-..
T Consensus       180 l~~~~~~q~~g~Iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~p~L~~l~ls~~~~~l~~gam~~  259 (376)
T c3kscD_         180 LQGRNEDEEKGAIVKVKGGLSIITVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFV  259 (376)
T ss_dssp             HTTTTCCTTTCSEEECSSCCCCCCCSSSCCEEECSTTSCCSEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTCEEE
T ss_pred             HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECHHHHHHHHCCCEEEEEEEEECCCEEC
T ss_conf             63012334453169724665345444444556577610068502588579986554401010035279999950785216


Q ss_pred             EEC-CCCEEEEEEEEEEEEECCCCCC-----CEEECCCCEEEECCCCEEEEEECCC-EEEEEEE
Q ss_conf             736-9975999999518998176677-----6064347248965896599994898-0899997
Q batch____       174 FQL-HGPRAYLQSIHGKFHALTHHEE-----KAALTCGDGAFIRDEANITLVADSP-LRALLID  230 (233)
Q Consensus       174 ~~~-~~~~~~i~v~~G~~~i~~~~~~-----~~~l~~gd~~~i~~~~~i~i~a~~~-a~~llid  230 (233)
                      -.- +....++||++|++.+.-...+     ...+.+||...+..+--+...|..+ ++++-|.
T Consensus       260 PH~~~~A~ei~~V~~G~~~v~iv~~~g~~~~~~~v~~G~vfvvP~g~~~~~~a~~~~~~~v~f~  323 (376)
T c3kscD_         260 PHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFK  323 (376)
T ss_dssp             EEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred             CCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEECCCCEEEEEECCCCEEEEEEE
T ss_conf             6116886489999960289999829987799615067519999799469999168876999996