Return to main results Retrieve Phyre Job Id

Job DescriptionP28722
Confidence100.00%DateThu Jan 5 11:45:14 GMT 2012
Rank11Aligned Residues114
% Identity19%Templated3bwuc1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution1.76

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.. ......
Predicted Secondary structure 






























..



Query SS confidence 







































































. .





Query Sequence  GMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQAT. . VPLQSE
Query Conservation   
    



         
 
 
      


  
           





   
 
   
 


     .. 
 
 
Alig confidence 







































































..





Template Conservation 

 
  



         
 
 
       


 
           






 

 
   
 


       

 


Template Sequence  GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRE
Template Known Secondary structure 
S
STT
S

TT
TTS


SSSSSS
STT
S
SSS
Template Predicted Secondary structure 





































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   99100.........110.........120.........130......
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  ELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLP
Query Conservation    
 
 
  

        
    
  






  
 
Alig confidence 














..




















Template Conservation 

  
 
  

    ..
 
 
 

  






  

Template Sequence  SLFWMNVKAIPSMDE. . NTLQLAIISRIKLYYRPAKLA
Template Known Secondary structure 



..






TT

Template Predicted Secondary structure 





..






Template SS confidence 





































   81........90..... ....100.........110......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions