Job Description P28722 Confidence 25.03% Date Thu Jan 5 11:45:14 GMT 2012 Rank 63 Aligned Residues 133 % Identity 14% Template c3hs8A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:adaptor protein complex ap-2, alpha 2 subunit; PDBTitle: intersectin 1-peptide-ap2 alpha ear complex Resolution 1.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		T	S	V	L	L	V	D	E	K	R	G	E	A	S	I	N	I	K	N	T	D	D	H	P	S	L	.	L	Y	T	T	I	V	D	L	P	E	S	N	K	S	I	R	L	I	P	T	Q	P	V	I	R	V	E	A	G	Q	V	Q	Q	V	R	F	L	L	Q	A	T	V	P	L	Q	S	E	E	L	K	R	V	T
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		G	L	K	S	E	F	R	Q	N	L	G	R	M	F	I	F	Y	G	N	K	T	S	T	Q	F	L	N	F	T	P	T	L	I	C	A	D	D	L	Q	T	N	L	N	L	Q	T	K	P	V	D	P	T	V	D	G	G	A	Q	V	Q	Q	V	V	N	I	E	C	I	S	D	F	T	E	A	P	V	L	N	I	Q
Template Known Secondary structure									T	T												S	S	S		B	B	S									T	T														S		B		T	T													S
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		F	E	G	I	P	P	K	D	D	K	S	S	R	V	T	V	S	I	R	Q	D	L	P	V	L	I	H	P	A	S	L	P	E	E	.	.	R	E	T	W	K	F	L	E	W	R	K	N	G	D	Q	I	E	I	S	N	P	S	N	Y
Query Conservation																																				.	.
Alig confidence					.	.	.	.																												.	.
Template Conservation					.	.	.	.
Template Sequence		F	R	Y	.	.	.	.	G	G	T	F	Q	N	V	S	V	K	L	P	I	T	L	N	K	F	F	Q	P	T	E	M	A	S	Q	D	F	F	Q	R	W	K	Q	L	S	N	P	Q	Q	E	V	Q	N	I	F	K	A	K	H	P	M
Template Known Secondary structure					.	.	.	.	T	T													G	G	G	G																				S	G	G	G									S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		805	.	.					.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions