Job Description P28722 Confidence 34.84% Date Thu Jan 5 11:45:14 GMT 2012 Rank 55 Aligned Residues 86 % Identity 10% Template c3h6aB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-4; PDBTitle: structure of the calx-beta domain of integrin beta42 crystallized in the presence of calcium Resolution 1.61 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.
Predicted Secondary structure																																											.																					.											.
Query SS confidence																																											.																					.											.
Query Sequence		M	V	P	E	T	S	V	L	L	V	D	E	K	R	G	E	A	S	I	N	I	K	N	T	D	D	H	P	S	L	L	Y	T	T	I	V	D	L	P	E	S	.	N	K	S	I	R	L	I	P	T	Q	P	V	I	R	V	E	A	G	Q	V	.	Q	Q	V	R	F	L	L	Q	A	T	.	V	P	L	Q	S	E
Query Conservation																																											.																					.											.
Alig confidence																																											.																					.											.
Template Conservation
Template Sequence		V	S	F	E	Q	P	E	F	S	V	S	R	G	D	Q	V	A	R	I	P	V	I	R	R	V	L	D	G	G	K	S	Q	V	S	Y	R	T	Q	D	G	T	A	Q	G	N	R	D	Y	I	P	V	E	G	E	L	L	F	Q	P	G	E	A	W	K	E	L	Q	V	K	L	L	E	L	L	L	R	G	R	Q	V
Template Known Secondary structure					S		S						T	T		S										S			S	S											S	S	S		B	T	T	T	B											T	T										B						T	T
Template Predicted Secondary structure
Template SS confidence
		992	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.
		99	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	K	R	V	T	F	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	F	H	V	Q	L	S	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1077	.	.	1080	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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