Job Description P28722 Confidence 24.06% Date Thu Jan 5 11:45:14 GMT 2012 Rank 65 Aligned Residues 135 % Identity 15% Template c3fcsA_ PDB info PDB header:cell adhesion/blood clotting Chain: A: PDB Molecule:integrin, alpha 2b; PDBTitle: structure of complete ectodomain of integrin aiibb3 Resolution 2.55 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		E	A	S	I	N	I	K	N	T	D	D	H	P	S	L	L	Y	T	T	I	V	D	L	P	E	.	.	.	.	.	.	.	.	S	N	K	S	I	R	L	I	P	T	Q	P	V	I	R	V	E	A	G	Q	V	Q	Q	V	R	F	L	L	Q	A	T	V	P	L	Q	S	E	E	L	K	R	V	T	F	E	G	I
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.													.	.	.	.																														.
Template Conservation																																															.	.	.	.																														.
Template Sequence		E	L	Q	M	D	A	A	N	E	G	E	G	A	Y	E	A	E	L	A	V	H	L	P	Q	G	A	H	Y	M	R	A	L	S	N	V	E	F	E	R	L	I	C	N	Q	K	.	.	.	.	K	E	N	E	T	R	V	V	L	C	E	L	G	N	P	M	K	K	N	A	Q	I	G	I	A	M	L	V	S	.	V
Template Known Secondary structure											S	S		B	T	T									T	T											.			B							.	.	.	.		S	S	S	S									T	T	B		T	T											.
Template Predicted Secondary structure																																															.	.	.	.																														.
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.					.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.		.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.																.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		P	P	K	D	D	K	S	S	R	V	T	V	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	D	L	P	V	L	I	H	P	A	S	L	P	E	E	R	E	T	W	K	F	L	E	W	R	K	N	G	D	Q	.	.	.	.	.	I	E	I	S	N	P	S	N	Y	V	V	R	M	T	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation
Template Sequence		G	N	L	E	E	A	G	E	S	V	S	F	Q	L	Q	I	R	S	K	N	S	Q	N	P	N	S	K	I	V	L	L	D	V	P	V	R	A	E	A	Q	V	E	L	R	G	N	S	F	P	A	S	L	V	V	A	A	S	W	G	P	K	V	E	H	T	Y	E	L	H	N	N	G	P	G	T	V	N	G	L	H
Template Known Secondary structure					T	T			S													S	S	S		S																								S	S																						S	S	S
Template Predicted Secondary structure
Template SS confidence
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	K	T	L	P	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	I	H	L	P	G	Q
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		799	800	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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