Phyre 2 alignment of P28722 with c2r39A

Job Description P28722
Confidence 7.34% Date Thu Jan 5 11:45:14 GMT 2012

Rank 91 Aligned Residues 65

% Identity 15% Template c2r39A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:fixg-related protein; PDBTitle: crystal structure of fixg-related protein from vibrio parahaemolyticus

Resolution 2.02 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence	S	I	N	I	K	N	T	D	D	H	P	S	L	L	Y	T	T	I	V	D	L	P	E	S	N	K	S	I	R	L	I	P	T	Q	P	V	I	R	V	E	A	G	Q	V	Q	Q	V	R	F	L	L	Q	A	T	V	P	L	.	.	Q	S	E	E	L	K	R	V	T	F	E	G	I
Query Conservation																																																										.	.
Alig confidence																								.	.	.	.	.																														.	.
Template Conservation																								.	.	.	.	.
Template Sequence	T	L	K	V	I	N	K	T	Q	Q	V	Q	E	Y	N	L	D	V	K	G	L	N	D	.	.	.	.	.	V	S	W	Y	G	K	Q	T	I	Q	V	E	P	G	E	V	L	N	L	P	X	S	L	G	A	D	P	D	K	L	N	S	A	I	T	T	I	Q	F	I	L	T	D	K
Template Known Secondary structure								S	S	S										S		S	S	.	.	.	.	.					S								T	T													G	G	G		S	S	S											G
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
	405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.						.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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