Job Description P28722 Confidence 100.00% Date Thu Jan 5 11:45:14 GMT 2012 Rank 1 Aligned Residues 193 % Identity 23% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		T	L	A	T	G	M	V	P	E	T	S	V	L	L	V	D	E	K	R	G	E	A	S	I	N	I	K	N	T	D	D	H	P	S	L	L	Y	T	T	I	V	D	L	P	E	S	N	K	S	I	R	L	I	P	T	Q	P	V	I	R	V	E	A	G	Q	V	Q	Q	V	R	F	L	L	Q	A	T	.	V	P	L
Query Conservation																																																																														.
Alig confidence																																																	.	.	.																											.
Template Conservation																																																	.	.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	G	G	V	F	P	R
Template Known Secondary structure										S	S	S						T	T		S										S	S	S											T	T	S			.	.	.						S	S						T	T											S					S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		Q	S	E	E	L	K	R	V	T	F	E	G	I	P	P	K	D	D	K	S	S	R	V	T	V	S	I	R	Q	D	L	P	V	L	I	H	P	A	S	L	P	E	.	E	R	E	T	W	K	F	L	E	W	R	K	N	G	D	Q	I	E	I	S	N	P	S	N	Y	V	V	R	M	T	L	Q	F	K	T	L	P
Query Conservation																																												.
Alig confidence																				.	.																							.																																			.	.	.
Template Conservation																				.	.																																																										.	.	.
Template Sequence		D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	V	G	.	.	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P	S	P	F	Y	M	N	I	G	E	L	T	F	.	.	.
Template Known Secondary structure		S	S																	.	.																		T	T	S		S		G	G	G	T	G	G	G							T	T								S	S	S										.	.	.
Template Predicted Secondary structure																				.	.																																																										.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	K	T	G	A	I	N	K	T	Y	F	L	P	H	T	S	T	T	T	A	L	T	N	A	T	D	T	K	V	E	F	Y	P	A	S	R	Y	G	Y	R	G	N	K	Y	V	T	D	L
Query Conservation
Alig confidence		.	.																						.	.	.	.
Template Conservation		.	.																						.	.	.	.
Template Sequence		.	.	G	G	K	S	I	P	S	H	Y	I	P	P	K	S	T	W	A	F	D	L	A	.	.	.	.	R	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L	Y	S	K	N	V
Template Known Secondary structure		.	.	T	T										T	T									.	.	.	.								B		T	T	S		B
Template Predicted Secondary structure		.	.																						.	.	.	.
Template SS confidence
				185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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