Job Description P28722 Confidence 100.00% Date Thu Jan 5 11:45:14 GMT 2012 Rank 4 Aligned Residues 187 % Identity 19% Template c1qpxA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:papd chaperone; PDBTitle: crystal structures of self-capping papd chaperone homodimers Resolution 2.40 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.
Predicted Secondary structure																														.																.																														.	.	.
Query SS confidence																														.																.																														.	.	.
Query Sequence		G	M	V	P	E	T	S	V	L	L	V	D	E	K	R	G	E	A	S	I	N	I	K	N	T	D	D	H	.	P	S	L	L	Y	T	T	I	V	D	L	P	E	S	N	.	K	S	I	R	L	I	P	T	Q	P	V	I	R	V	E	A	G	Q	V	Q	Q	V	R	F	L	L	Q	A	T	.	.	.	V	P	L
Query Conservation																														.																.																														.	.	.
Alig confidence																														.																.																														.	.	.
Template Conservation
Template Sequence		A	V	S	L	D	R	T	R	A	V	F	D	G	S	E	K	S	M	T	L	D	I	S	N	D	N	K	Q	L	P	Y	L	A	Q	A	W	I	E	N	E	N	Q	E	K	I	I	T	G	P	V	I	A	T	P	P	V	Q	R	L	D	P	G	A	K	S	M	V	R	L	S	T	T	P	D	I	S	K	L	P	Q
Template Known Secondary structure						S		S						T	T	S	S											S	S	S											T	T	S				S	S	S	S					S	S						T	T											G	G	G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		Q	S	E	E	L	K	R	V	T	F	E	G	I	P	P	K	D	D	K	S	S	R	V	T	V	S	I	R	Q	D	L	P	V	L	I	H	P	A	S	L	P	E	E	.	.	R	E	T	W	K	F	L	E	W	R	K	N	G	D	Q	I	E	I	S	N	P	S	N	Y	V	V	R	M	T	L	Q	F	K	T	L
Query Conservation																																													.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	E	S	L	F	Y	F	N	L	R	E	I	P	P	.	.	.	.	.	.	.	.	.	I	A	L	C	T	K	I	K	L	F	Y	R	P	A	A	I	K	T	R	P	N	E	V	W	Q	D	Q	L	I	L	N	K	V	S	G	G	Y	R	I	E	N	P	T	P	Y	Y	V	T	V	I	G	L	G	G	S	E
Template Known Secondary structure		S	S														.	.	.	.	.	.	.	.	.														G	G	G				T	T				G	G	G							T	T								S	S	S									S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	G	K	T	G	A	I	N	K	T	Y	F	L	P	H	T	S	T	T	T	A	L	T	N	A	T	D	T	K	V	E	F	Y	P	A	S	R	Y	G	Y	R	G	N	K
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		K	Q	A	E	E	G	E	F	E	T	V	M	L	S	P	R	S	E	Q	T	V	K	S	A	.	.	N	Y	N	T	P	Y	L	S	Y	I	N	D	Y	G	G	R	P	V	L
Template Known Secondary structure							S									T	T									.	.			S	S								T	T	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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