Return to main results Retrieve Phyre Job Id

Job DescriptionP28722
Confidence6.22%DateThu Jan 5 11:45:14 GMT 2012
Rank95Aligned Residues67
% Identity15%Templatec1gycA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:laccase 2; PDBTitle: crystal structure determination at room temperature of a2 laccase from trametes versicolor in its oxidised form3 containing a full complement of copper ions
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.. .......100.........110.........120.........130.......
Predicted Secondary structure 









.....

















Query SS confidence 





















. . . . .












































Query Sequence  TQPVIRVEAGQVQQVRFLLQAT. . . . . VPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPE
Query Conservation 


   
 
   
 


     ..... 
 
 
  
 
 
  

        
    
  






  
  
Alig confidence 





















.....












































Template Conservation    
 
 
  
   
 




       
 
 
    


 

    
     
 
 



 

 
      
Template Sequence  ALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG
Template Known Secondary structure 



TT


SS

TT

TTSB
TT


S
SS
Template Predicted Secondary structure 



























Template SS confidence 







































































   184.....190.........200.........210.........220.........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions