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Job DescriptionP76503
Confidence99.93%DateThu Jan 5 12:23:40 GMT 2012
Rank46Aligned Residues277
% Identity23%Templatec3fk5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:3-oxoacyl-synthase iii; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase iii, fabh (xoo4209) from xanthomonas oryzae pv.3 oryzae kacc10331
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  TPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
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Template Sequence  AGIHARRLWDQDVQASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAF
Template Known Secondary structure  T




TT

T

GGG

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S
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T

TT



GGG
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   47..50.........60.........70.........80.........90.........100.........110.........120......
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGL
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Template Sequence  INGMDIAARMLERGEIDYALVVDGETANLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS
S

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   127..130.........140.........150......
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  RMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDR
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Template Sequence  . . YEKTLERMTSPDVTEEEFRNELA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..T
TT

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   157..160.........170.........
 
   263......270.........280.........290.........300.........310...... ...320........
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Query Sequence  KHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDML. . . . . . . . . . . . . . LGPAWSTPLALE
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Template Sequence  . . . . . . . . . ALTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFLAARQ
Template Known Secondary structure  .........TTB

GGGSTTS

GGGGGG
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   180.........190.........200.........210.........220.........230.........240.........250
 
   329330.........340.........350.........360.........370.........380.........390.........400........
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Query Sequence  RAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHE
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Template Sequence  VLGWAVDELDQFVIHQVSRPHTAAFVKSFG. . . . . . . . . . . . . . . . . IDPAKVMTI. . FGEHGNIGPASVPIVLSKLKEL
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GGG
S

S
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GGGB


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B
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   251........260.........270.........280 ......... 290.........300.........310.
 
   409410.........420.........430....
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Query Sequence  LRRRGGGFGLVTACAAGGLGAAMVLE
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Template Conservation       
  
     
 
       
 
Template Sequence  GRLKKGDRIALLGIGSGLNCSMAEVV
Template Known Secondary structure  T


TT
TTT
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   312.......320.........330.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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