Return to main results Retrieve Phyre Job Id

Job DescriptionP76503
Confidence100.00%DateThu Jan 5 12:23:40 GMT 2012
Rank4Aligned Residues385
% Identity38%Templatec2vu2D_
PDB info PDB header:transferaseChain: D: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: biosynthetic thiolase from z. ramigera. complex with s-2 pantetheine-11-pivalate.
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  IAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYS
Query Conservation 
 


   



   
        


  
   

 



    

 
  
               
   

        
Alig confidence 















































































Template Conservation 
 


   



   
        


  
   

 



   


 
  
           
   
  


        
Template Sequence  IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWG
Template Known Secondary structure 


B
TTSTTTT

T

GGG


S

TTS
S
TT

TTS
Template Predicted Secondary structure 
































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  VSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPA
Query Conservation 
   



  

  
   
 

    


 
 
  
                                            
Alig confidence 





























































.................
Template Conservation 
   


   

  
   
 

  
 


 
 
  
                          ................. 
Template Sequence  MNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKD. . . . . . . . . . . . . . . . . G
Template Known Secondary structure 

GGGTTS
S

STT




SS


SS



.................
Template Predicted Secondary structure 










































.................
Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140...... .
 
   175....180.........190.........200.........210.........220.........230....... ..240.........250..
Predicted Secondary structure 
























..









Query SS confidence 






























































. .














Query Sequence  VAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQP. . LVEDNNIRGNSSLAD
Query Conservation           
   
       
 
 
    

  
   
  
           
         ..   
           
Alig confidence 






























































..














Template Conservation               
       
   
  
  
      
                                 
       
Template Sequence  LTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDS
Template Known Secondary structure  TB
TTT
SBTT

TTTTTTTB



SS


S
TT

SS

STT
Template Predicted Secondary structure 



































Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   253......260.........270.........280.........290.........300.........310.........320.........330..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  YAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGL
Query Conservation 
  
 
         
        







 
   
  

  
 
 
 
                  
   
   


Alig confidence 











.













































.



















Template Conservation           
  . 
   
     







 
   
  

  
 
 
 
        .         
   
   


Template Sequence  MAKLRPAFDKEG. TVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDP. KVMGTGPIPASRKALERAGW
Template Known Secondary structure  TTTS

SSSTTS.S

TTTB



BTT


S

G.GGGGGTT
Template Predicted Secondary structure 








.























.






Template SS confidence 















































































   228.230......... 240.........250.........260.........270.........280..... ....290.........300.....
 
   333......340.........350.........360.........370.........380.........390.........400.........410..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  TMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRR
Query Conservation     


  

 
 
    
   
 

    
        
        

  

  
 


 



     
   


  
Alig confidence 





























.................
































Template Conservation     


  



 
        
 


   ................. 

  

    


 



   
 
   


  
Template Sequence  KIGDLDLVEANEAFAAQACAVNKDLGWDPS. . . . . . . . . . . . . . . . . IVNVNGGAIAIGHPIGASGARILNTLLFEMKRR
Template Known Secondary structure 
GGG
S

SB


GG.................GBSTT




Template Predicted Secondary structure 












.................









Template SS confidence 















































































   306...310.........320.........330..... ....340.........350.........360........
 
   413......420.........430.....
Predicted Secondary structure 








Query SS confidence 






















Query Sequence  GGGFGLVTACAAGGLGAAMVLEA
Query Conservation   
  

     


 
   


 
Alig confidence 






















Template Conservation       
     


   
 


 
Template Sequence  GARKGLATLCIGGGMGVAMCIES
Template Known Secondary structure  T
STTT
Template Predicted Secondary structure 






Template SS confidence 






















   369370.........380.........390.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions