 |
Job Description | P76503 | Confidence | 99.97% | Date | Thu Jan 5 12:23:40 GMT 2012 |
Rank | 28 | Aligned Residues | 299 |
% Identity | 25% | Template | c2iwyB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; |
PDBTitle: human mitochondrial beta-ketoacyl acp synthase
|
Resolution | 2.06 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
V | T | R | Q | G | D | R | I | A | I | V | S | . |
G | L | R | T | P | F | A | R | Q | A | T | A | F | H | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | P | A | V | D | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
| . |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
| . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | S | R | L | H | R | R | V | V | I | T | G | I | G | L | V | T | P | L | G | V | G | T | H | L | V | W | D | R | L | I | G | G | E | S | G | I | V | S | L | V | G | E | E | Y | K | S | I | P | C | S | V | A | A | Y | V | P | R | G | S | D | E | G | Q | F | N | E | Q | N | F | V | S | K | S | D | I | K | S | M | S |
Template Known Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  | S |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
|
| S | G | G | G | T | T |
| S |
|
|  |  |  |
|
|
| B | S | S | S | T | T |
| B |
| G | G | G | T | S |
|  |  |  |  | T | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|