Job Description P76503 Confidence 99.92% Date Thu Jan 5 12:23:40 GMT 2012 Rank 51 Aligned Residues 262 % Identity 22% Template c2gyoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: methanethiol-cys 112 inhibition complex of e. coli ketoacyl synthase2 iii (fabh) and coenzyme a Resolution 2.00 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	P	F	A	R	Q	A	T	A	F	H	G	I	P	A	V	D	L	G	K	M	V	V	G	E	L	L	A	R	S	E	I	P	A	E	V	I	E	Q	L	V	F	G	Q	V	V	Q	M	P	E	A	P	N	I	A	R	E	I	V	L	G	T	G	M	N	V	H	T	D	A	Y	S	V	S	R	A	C	A	T
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		R	T	G	I	R	E	R	H	I	A	A	P	N	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T	S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	.	G	C	P	A	F	D	V	A	A	A	C	A	G
Template Known Secondary structure			T										T	T																			T			G	G	G									S			S		S	S	S										T	T			.	S	S								G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	Q	A	V	A	N	V	A	E	S	L	M	A	G	T	I	R	A	G	I	A	G	G	A	D	S	S	S	V	L	P	I	G	V	S	K	K	L	A	R	V	L	V	D	V	N	K	A	R	T	M	S	Q	R	L	K	L	F	S	R	L	R	L	R	D	L	M	P	V	P	P	A	V	A	E	Y	S	T	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T	S		S										T	T	T	T	S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	M	G	D	T	A	E	Q	M	A	K	T	Y	G	I	T	R	E	Q	Q	D	A	L	A	H	R	S	H	Q	R	A	A	Q	A	W	S	D	G	K	L	K	E	E	V	M	T	A	F	I	P	P	Y	K	Q	P	L	V	E	D	N	N	I	R	G	N	S	S	L	A	D	Y	A	K	L	R	P	A	F	D
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320											.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	H	G	T	V	T	A	A	N	S	T	P	L	T	D	G	A	A	A	V	I	L	M	T	E	S	R	A	K	E	L	.	.	.	.	.	.	.	.	.	G	L	V	P	L	G	Y	L	R	S	Y	A	F	T	A	I	D	V	W	Q	D	M	L	L	G	P	A	.	.	.	.	.	.	.	.	.	.	W	S
Query Conservation																																		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	I	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		T	T	B													S	S		S										G	G	G	G	G	G								T	T	S	S					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	A	L	E	R	A	G	L	T	M	S	D	L	T	L	I	D	M	H	E	A	F	A	A	Q	T	L	A	N	I	Q	L	L	G	S	E	R	F	A	R	E	A	L	G	R	A	H	A	T	G	E	V	D	D	S	K	F	N	V	L	G	G	S	I	A	Y	G	H	P	F	A	A	T	G	A	R	M	I
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	M	D	N	V	V	V	T	.	.	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L
Template Known Secondary structure									T	T			G	G	G									S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	B				.	.						B		G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.																		260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	T	L	H	E	L	R	R	R	G	G	G	F	G	L	V	T	A	C	A	A	G	G	L	G	A	A	M	V	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	A	V	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	S	A	L	V	R
Template Known Secondary structure							T	T		S		T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions