Job Description P76503 Confidence 100.00% Date Thu Jan 5 12:23:40 GMT 2012 Rank 10 Aligned Residues 372 % Identity 38% Template c2c7yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-ketoacyl-coa thiolase 2; PDBTitle: plant enzyme Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																																																	.
Query SS confidence																		.																																																	.
Query Sequence		Q	G	D	R	I	A	I	V	S	G	L	R	T	P	F	A	.	R	Q	A	T	A	F	H	G	I	P	A	V	D	L	G	K	M	V	V	G	E	L	L	A	R	S	E	I	P	A	E	V	I	E	Q	L	V	F	G	Q	V	V	Q	M	P	E	A	P	.	N	I	A	R	E	I	V	L	G	T	G	M	N	V
Query Conservation																		.																																																	.
Alig confidence																		.																																																	.
Template Conservation
Template Sequence		Y	G	D	D	V	V	I	V	A	A	H	R	T	P	L	C	K	S	K	R	G	N	F	K	D	T	Y	P	D	D	L	L	A	P	V	L	R	A	L	I	E	K	T	N	L	N	P	S	E	V	G	D	I	V	V	G	T	V	L	A	P	G	S	Q	R	A	S	E	C	R	M	A	A	F	Y	A	G	F	P	E
Template Known Secondary structure			T	T	T														T	T	T		T	T	T	T			T																T			G	G	G										S	S		T	T													T	T			T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	D	A	Y	S	V	S	R	A	C	A	T	S	F	Q	A	V	A	N	V	A	E	S	L	M	A	G	T	I	R	A	G	I	A	G	G	A	D	S	S	S	V	L	P	I	G	V	S	K	K	L	A	R	V	L	V	D	V	N	K	A	R	T	M	S	Q	R	L	K	L	F	S	R	L	R	L	R	D	L
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	A	V	R	T	V	N	R	Q	C	S	S	G	L	Q	A	V	A	D	V	A	A	A	I	K	A	G	F	Y	D	I	G	I	G	A	G	L	E	S	M	T	T	N	P	M	A	W	E	K	K	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S								S	S			S													T	T	S		S										S				S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		M	P	V	P	P	A	V	A	E	Y	S	T	G	L	R	M	G	D	T	A	E	Q	M	A	K	T	Y	G	I	T	R	E	Q	Q	D	A	L	A	H	R	S	H	Q	R	A	A	Q	A	W	S	D	G	K	L	K	E	E	V	M	T	A	F	I	P	.	.	.	.	.	.	.	.	P	Y	K	Q	P	L	V	E
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Q	A	Q	N	C	L	L	P	M	G	V	T	S	E	N	V	A	Q	R	F	G	V	S	R	Q	E	Q	D	Q	A	A	V	D	S	H	R	K	A	A	A	A	T	A	A	G	K	F	K	D	E	I	I	P	V	K	T	K	L	V	D	P	K	T	G	D	E	K	P	I	T	V	S	V
Template Known Secondary structure		.	.	.	.	.	.	.																				T	T																							T	T	T	T	T	T	T	B										T	T	T										S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	N	I	R	G	N	S	S	L	A	D	Y	A	K	L	R	P	A	F	D	R	K	H	G	T	V	T	A	A	N	S	T	P	L	T	D	G	A	A	A	V	I	L	M	T	E	S	R	A	K	E	L	G	L	V	P	L	G	Y	L	R	S	Y	A	F	T	A	I	D	V	W	Q	D	M	L	L	G	P	A
Query Conservation
Alig confidence																								.																																																	.
Template Conservation																								.																																																	.
Template Sequence		D	D	G	I	R	P	T	T	T	L	A	S	L	G	K	L	K	P	V	F	K	K	.	D	G	T	T	T	A	G	N	S	S	Q	V	S	D	G	A	G	A	V	L	L	M	K	R	S	V	A	M	Q	K	G	L	P	V	L	G	V	F	R	T	F	A	A	V	G	V	D	P	.	A	I	M	G	I	G	P	A
Template Known Secondary structure			T	T			T	T							T	T			B	S	S	S	T	.	T		S		B	S	S	S	B			B																			T																	T	.	T	S	T	T
Template Predicted Secondary structure																								.																																																	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	T	P	L	A	L	E	R	A	G	L	T	M	S	D	L	T	L	I	D	M	H	E	A	F	A	A	Q	T	L	A	N	I	Q	L	L	G	S	E	R	F	A	R	E	A	L	G	R	A	H	A	T	G	E	V	D	D	S	K	F	N	V	L	G	G	S	I	A	Y	G	H	P	F	A	A	T	G	A	R
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	I	P	A	A	V	K	A	A	G	L	E	L	D	D	I	D	L	F	E	I	N	E	A	F	A	S	Q	F	V	Y	C	R	N	K	L	G	L	D	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	N	V	N	G	G	A	M	A	I	G	H	P	L	G	A	T	G	A	R
Template Known Secondary structure											T	T			G	G	G									S	B												T			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	B	S	T	T								B		G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		401	.	.	.	.	.	.	.	.	410	.	.			.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	I	T	Q	T	L	H	E	L	R	R	R	.	.	G	G	G	F	G	L	V	T	A	C	A	A	G	G	L	G	A	A	M	V	L	E	A
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		C	V	A	T	L	L	H	E	M	K	R	R	G	K	D	C	R	F	G	V	V	S	M	C	I	G	T	G	M	G	A	A	A	V	F	E	R
Template Known Secondary structure															T	T										S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.