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Job DescriptionP76503
Confidence100.00%DateThu Jan 5 12:23:40 GMT 2012
Rank23Aligned Residues295
% Identity24%Templatec1tqyC_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-ketoacyl synthase/acyl transferase; PDBTitle: the actinorhodin ketosynthase/chain length factor
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13...... 20.........30.... .....40......
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Query Sequence  DRIAIVS. GLRTPFARQATAFHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IPAVDLGKMVVG
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Template Sequence  RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR
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TTST





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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   47..50.........60 .........70 .........80.........90
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Query Sequence  ELLARSEIPAEVIE. . . . QLVFGQVVQM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PEAPNIAREIVLGTGMNVHT
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Template Sequence  EAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA. . EG
Template Known Secondary structure  T

TTT

GGG
SSTTTTTT
SS

GGG

TTTSTTT
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   83......90.........100.........110.........120.........130.........140.........150........ .160
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  DAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMP
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Template Sequence  PVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGTTS
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   161........170.........180.........190.........200.........210.
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  VPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSL
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Template Conservation  ........................................................................        
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RATTARND
Template Known Secondary structure  ........................................................................T
B


TT
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   212.......
 
   251........260.........270.........280.........290.........300.........310. ........320......
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Query Sequence  ADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDV. . . . WQDMLLGPAWSTPLA
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Template Sequence  DPEHASRPFDGTRDGFV. . . . . . . LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVA
Template Known Secondary structure 
GGG


TT
TT

SB
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TT
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   220.........230...... ...240.........250.........260.........270.........280.........290..
 
   327..330.........340....... ..350.........360.........370......... 380......... 390.........400
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Query Sequence  LERAGLTMSDLTLIDMHEAFA. . . . AQTLANIQLLGSERFAREALGRAHATGEVDDS. KFNVLGGSIA. YGHPFAATGAR
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Template Sequence  LDESRTDATDIDYINAHGSGTRQNDRHETAAYKRA. . . . . . . . . . . . . . . . . . LGEHARRTPVSSIKSMVGHSLGAIGSL
Template Known Secondary structure  T

GGG



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T
B
TTT
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   293......300.........310.........320....... ..330.........340.........350....
 
   401........410. ........420.........430.....
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Query Sequence  MITQTLHELRR. . . . . . . . . . . . . . . . . . . . . . . . . . . RGGGFGLVTACAAGGLGAAMVLEA
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Template Sequence  EIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD
Template Known Secondary structure  T

BTT

S
BTTB
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BSS



STTT
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   355....360.........370.........380.........390.........400.........410......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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