Return to main results Retrieve Phyre Job Id

Job DescriptionP27278
Confidence96.55%DateThu Jan 5 11:43:37 GMT 2012
Rank293Aligned Residues113
% Identity22%Templated1ubea1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260.........270.........280.........290.........300.........310.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTD
Query Conservation 
 
 
 
  






   

       
 
  
    
        
   
   
   
   
          

 

 
Alig confidence 





















...........................................














Template Conservation   
  
 
 

 


 
 
    ...........................................     
  




 
Template Sequence  RVIEIYGPESSGKTTVALHAVA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NAQAAGGIAAFIDAE
Template Known Secondary structure  S
STTSS...........................................TS

SS
Template Predicted Secondary structure 






...........................................





Template SS confidence 















































































   62.......70.........80... ......90........
 
   312.......320........ .330.........340.........350.........360.........370.......
Predicted Secondary structure 




..............



















Query SS confidence 
















. . . . . . . . . . . . . .
















































Query Sequence  FVTTQAFCKKYEGREHP. . . . . . . . . . . . . . FVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLE
Query Conservation     
  
          ..............          






        

 
       
      
   
 
Alig confidence 
















..............














.
































Template Conservation             
 
                     
       


.



  
                    
   
 
Template Sequence  HALDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIV. IDSVAALVPRAEIEGLQARLMSQALRKMTGALN
Template Known Secondary structure 



T

GGG


SSTTS
.S
STT





Template Predicted Secondary structure 

















.









Template SS confidence 















































































   99100.........110.........120.........130.........140.... .....150.........160.........170.......
 
   378.380........
Predicted Secondary structure 





Query SS confidence 










Query Sequence  ENNIEFVRVEE
Query Conservation        
 
  
Alig confidence 










Template Conservation       

 


Template Sequence  NSGTTAIFINQ
Template Known Secondary structure 



Template Predicted Secondary structure 





Template SS confidence 










   186...190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions