Job Description P27278 Confidence 98.72% Date Thu Jan 5 11:43:37 GMT 2012 Rank 87 Aligned Residues 158 % Identity 14% Template d1rkba_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	N	T	T	S	A	W	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F	A	V	K	Y	A	N	K	V	A	F	I	D	T
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		L	P	N	I	L	L	T	G	T	P	G	V	G	K	T	T	L	G	K	E	L	A	S	K	S	G	L	K	Y	.	.	.	I	N	V	G	D	L	A	R	E	E	Q	L	Y	D	G	Y	D	E	E	Y	D	C	P	I	L	D	E	D	R	V	V	D	E	L	D	N	Q	M	R	E	G	G	V	I	V	D	Y	H
Template Known Secondary structure										S	T	T	S	S																	.	.	.										T	T		B					S	S	S	S				B																							S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.								.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.																						.
Query SS confidence																																																					.	.	.	.	.	.	.																						.
Query Sequence		D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	R	F	D	L	V	I	L	L	E	N	N	T	P	W	V	A	D	G	L	R	S	L	G	S	.	.	.	.	.	.	.	S	V	D	R	K	E	F	Q	N	L	L	V	E	M	L	E	E	N	N	I	E	.
Query Conservation																																																					.	.	.	.	.	.	.																						.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.																						.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	F	P	E	R	W	F	H	I	V	F	V	L	R	T	D	T	N	V	L	Y	E	R	L	E	T	R	G	Y	N	E	K	K	L	T	D	N	I	Q	C	E	I	F	Q	V	L	Y	E	E	A	T	A	S	Y	K	E	E	I
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		G	G	G		S																			T	T															T	T										S		G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.																				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		383	.	.	.	.	.	.	390	.				.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		F	V	R	V	E	E	E	D	Y	.	.	.	D	S	R	F	L	R	C	V	E	L	V	R	E	M	M	G	E	Q	R
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		V	H	Q	L	P	S	N	K	P	E	E	L	E	N	N	V	D	Q	I	L	K	W	I	E	Q	W	I	K	D	H	N
Template Known Secondary structure								S	S																						T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions