Return to main results Retrieve Phyre Job Id

Job DescriptionP27278
Confidence100.00%DateThu Jan 5 11:43:37 GMT 2012
Rank2Aligned Residues174
% Identity56%Templated1lw7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280.........290.........300....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  EVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANK
Query Conservation   

    
 
 
 
  






   

       
 
  
    
        
   
   
   
   
         
Alig confidence 















































































Template Conservation         
 


 
  






   

  
      
       
                                  
Template Sequence  EARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQXALGHQRYIDYAVRHSHK
Template Known Secondary structure 

GGGT


TTSTT


TTSSSS
TTSS
TTT
SS
Template Predicted Secondary structure 




























Template SS confidence 















































































   220.........230.........240.........250.........260.........270.........280.........290.........
 
   305....310.........320.........330.........340.........350.........360.........370.........380....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFV
Query Conservation   

 

    
  
                    






        

 
       
      
   
       
Alig confidence 
















































...........



















Template Conservation   

 
        
                     
    
        ...........                   
Template Sequence  IAFIDTDFITTQAFCIQYEGKAHPFLDSXIKEYPFDVTILLKNNTEQKQ. . . . . . . . . . . RQQFQQLLKKLLDKYKVPYI
Template Known Secondary structure  SS
S


S

S





S...........GGG


Template Predicted Secondary structure 





















...........



Template SS confidence 















































































   300.........310.........320.........330.........340........ .350.........360........
 
   385....390.........400.........
Predicted Secondary structure 






Query SS confidence 
























Query Sequence  RVEEEDYDSRFLRCVELVREMMGEQ
Query Conservation   
  

  

   

  
   
   
Alig confidence 
























Template Conservation   
      
    
   
       
Template Sequence  EIESPSYLDRYNQVKAVIEKVLNEE
Template Known Secondary structure 
SSTS

Template Predicted Secondary structure 






Template SS confidence 
























   380.........390.........400....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions