Job Description P27278 Confidence 95.65% Date Thu Jan 5 11:43:37 GMT 2012 Rank 438 Aligned Residues 77 % Identity 17% Template c3l0oB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:transcription termination factor rho; PDBTitle: structure of rna-free rho transcription termination factor from2 thermotoga maritima Resolution 2.35 Å

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		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.										.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		R	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	N	T	T	.	.	.	.	.	.	.	.	.	S	A	W	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	.	.	.	.	.	.	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D
Query Conservation																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	G	M	I	V	A	P	P	K	A	G	K	T	T	I	L	K	E	I	A	N	G	I	A	E	N	H	P	D	T	I	R	I	I	L	L	I	D	E	R	P	E	E	V	T	D	I	R	E	S	T	N	A	I	V	I	A	A	P	F	D	M	P	P	D	K	Q	V	K	V	A	E	L	T	L	E	M	A	K
Template Known Secondary structure										T	T	S	S																	T	T	S																			T	T	S		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	V	K	Y	A	N	K	V	A	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	V	E	F	N	Y	D	V	V	I	L
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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