Job Description P27278 Confidence 99.80% Date Thu Jan 5 11:43:37 GMT 2012 Rank 27 Aligned Residues 148 % Identity 13% Template c3h05A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein vpa0413; PDBTitle: the crystal structure of a putative nicotinate-nucleotide2 adenylyltransferase from vibrio parahaemolyticus Resolution 1.65 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	G	V	V	F	G	K	F	Y	P	L	H	T	G	H	I	Y	L	I	Q	R	A	C	S	Q	V	D	E	L	H	I	I	M	G	F	D	D	T	R	D	R	A	L	F	E	D	S	A	M	S	Q	Q	P	T	V	P	D	R	L	R	W	L	L	Q	T	F	K	Y	Q	K	N	I	R	I	H	A	F	N
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	A	I	F	G	S	A	F	N	P	P	S	L	G	H	K	S	V	I	E	S	L	S	H	F	D	L	V	L	L	E	P	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	D	Y	P	I	R	C	K	L	V	D	A	F	I	K	D	M	G	L	S	N	V	Q	R	S	D
Template Known Secondary structure												S	S										T	T		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.																												.	.	.
Query SS confidence																																																		.	.																												.	.	.
Query Sequence		E	E	G	M	E	P	Y	P	H	G	W	D	V	W	S	N	G	I	K	K	F	M	A	E	K	G	I	Q	P	D	L	I	Y	T	S	E	E	A	D	A	P	Q	Y	M	E	H	L	G	.	.	I	E	T	V	L	V	D	P	K	R	T	F	M	S	I	S	G	A	Q	I	R	E	N	P	F	R	Y	.	.	.
Query Conservation																																																		.	.																												.	.	.
Alig confidence																					.	.	.																											.	.																												.	.	.
Template Conservation																					.	.	.
Template Sequence		L	E	Q	A	L	Y	S	V	T	T	Y	A	L	L	E	K	I	Q	E	.	.	.	I	Y	P	T	A	D	I	T	F	V	I	G	P	D	N	F	F	K	F	A	K	F	Y	K	A	E	E	I	T	E	R	W	T	V	M	A	C	P	E	K	V	K	I	R	S	T	D	I	R	N	A	L	I	E	G	K	D	I
Template Known Secondary structure																					.	.	.		S	T	T	S													T	G	G	G	S	T	T								S								S	S														T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	Y	I	P	T	E	V	K	P	F	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	Y	T	T	P	T	V	S	E	L	L	L
Template Known Secondary structure		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions