Job Description P27278 Confidence 98.98% Date Thu Jan 5 11:43:37 GMT 2012 Rank 56 Aligned Residues 151 % Identity 21% Template c3gmiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0348 protein mj0951; PDBTitle: crystal structure of a protein of unknown function from2 methanocaldococcus jannaschii Resolution 1.91 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		R	Q	K	K	T	I	G	V	V	F	G	K	F	Y	P	L	H	T	G	H	I	Y	L	I	Q	R	A	C	S	Q	V	D	E	L	H	I	I	M	G	F	D	D	T	.	.	R	D	R	A	L	F	E	D	S	A	M	S	Q	Q	P	T	V	P	D	R	L	R	W	L	L	Q	T	F	K	Y	Q	K	N	I	R
Query Conservation																																													.	.
Alig confidence												.																																	.	.		.	.	.	.	.	.	.	.																						.
Template Conservation												.																																				.	.	.	.	.	.	.	.																						.
Template Sequence		N	K	D	K	I	V	C	D	F	T	.	E	Y	N	P	L	H	K	G	H	K	Y	A	L	E	K	G	K	E	H	G	I	F	I	S	V	L	P	G	P	L	E	R	S	G	R	.	.	.	.	.	.	.	.	G	I	P	Y	F	L	N	R	Y	I	R	A	E	M	A	I	R	A	G	A	D	.	I	V	V	E
Template Known Secondary structure		T										.			T	T														T	S	S									T	T	S	B		T	T	.	.	.	.	.	.	.	.	S	S	B		S	S													T		S	.
Template Predicted Secondary structure												.																																				.	.	.	.	.	.	.	.																						.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	H	A	F	N	E	E	G	M	E	P	Y	P	H	G	W	D	V	W	S	N	G	I	K	K	F	M	A	E	K	G	I	Q	P	D	L	I	Y	T	S	E	E	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																										.
Template Sequence		.	.	.	.	.	.	.	G	P	P	M	G	I	M	G	S	G	Q	Y	M	R	C	L	I	K	M	F	Y	S	L	G	A	.	E	I	I	P	R	G	Y	I	P	E	K	T	M	E	K	V	I	D	C	I	N	K	G	Y	H	I	Q	V	K	P	Y	K	I	I	C	I	E	T	G	E	I	L	G	E	K	L	N
Template Known Secondary structure		.	.	.	.	.	.	.				G	G	G	S																	T		.																						T	T							T	T					T	T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.																										.
Template SS confidence
									118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
															183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Q	Y	M	E	H	L	G	I	E	T	V	L	V	D	P	K	R	T	F	M	S	I	S	G	A	Q	I	R	E	N	P	F	R	Y	.	.	.	.	.	W	E	Y	I	P	T	E	V	K	P	F	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																							.														.	.	.	.	.
Template Conservation																																					.
Template Sequence		I	D	N	Y	V	I	A	S	M	S	Q	M	I	Y	K	L	N	R	E	G	L	K	F	N	P	K	F	V	F	V	K	R	L	E	G	.	I	S	G	T	K	I	R	E	A	I	F	S	G	K	F	E	D	I	K	N	M	L	P	K	T	T	L	S	I	L
Template Known Secondary structure		G	G	G																T	T													S			.												T	T		G	G	G	T	G	G	G	S
Template Predicted Secondary structure																																					.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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