Job Description P27278 Confidence 99.47% Date Thu Jan 5 11:43:37 GMT 2012 Rank 38 Aligned Residues 121 % Identity 20% Template c3glvB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:lipopolysaccharide core biosynthesis protein; PDBTitle: crystal structure of the lipopolysaccharide core biosynthesis protein2 from thermoplasma volcanium gss1 Resolution 1.99 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	G	V	V	F	G	K	F	Y	P	L	H	T	G	H	I	Y	L	I	Q	R	A	C	S	Q	V	D	E	L	H	I	I	M	G	F	D	D	T	R	D	R	A	L	F	E	D	S	A	M	S	Q	Q	P	T	V	P	D	R	L	R	W	L	L	Q	T	F	K	Y	Q	K	N	I	R	I	H	A	F	N
Query Conservation
Alig confidence																																														.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		M	I	R	V	M	A	T	G	V	F	D	I	L	H	L	G	H	I	H	Y	L	K	E	S	K	K	L	G	D	E	L	V	V	V	V	A	R	D	S	T	A	R	N	N	.	.	.	.	.	G	K	I	P	I	F	D	E	N	S	R	L	A	L	I	S	E	L	K	V	V	D	R	A	I	.	.	.	.	.	.
Template Known Secondary structure												S	S														T	T	S	S														T	T	.	.	.	.	.	T				S	S											T	S	T	T		S				.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	G	M	E	P	Y	P	H	G	W	D	V	W	S	N	G	I	K	K	F	M	A	E	K	G	I	Q	P	D	L	I	Y	T	S	E	E	A	D	A	P	Q	Y	M	E	H	L	G	I	E	T	V	L	V	D	P	K	R	T	F
Query Conservation
Alig confidence		.	.	.	.																	.	.												.	.
Template Conservation		.	.	.	.																	.	.												.	.
Template Sequence		.	.	.	.	L	G	H	E	G	D	M	M	K	T	V	I	E	V	K	P	.	.	D	I	I	T	L	G	Y	D	Q	K	F	.	.	D	E	A	E	L	Q	S	K	I	N	K	L	G	I	T	V	K	I	V	R	I	S	K	Y	D
Template Known Secondary structure		.	.	.	.				T	T												.	.	S						T	T				.	.												T	T
Template Predicted Secondary structure		.	.	.	.																	.	.												.	.
Template SS confidence
						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions