Job Description P27278 Confidence 97.35% Date Thu Jan 5 11:43:37 GMT 2012 Rank 187 Aligned Residues 105 % Identity 20% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.												.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	.	.	.	N	T	T	S	A	W	.	.	.	.	.	.	.	.	.	.	.	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F
Query Conservation																										.	.	.							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.							.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	.	.	.	H
Template Known Secondary structure										T	T	S	S															T	T										T	T															T	T							S	T	T													.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	Y	A	N	K	V	A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	R	F	D	L	V	I	L	L
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	.	.	.	.	.	.	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V
Template Known Secondary structure						T		S								S	S			.	.	.	.	.	.	S	S	S																S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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