Return to main results Retrieve Phyre Job Id

Job DescriptionP27278
Confidence96.57%DateThu Jan 5 11:43:37 GMT 2012
Rank292Aligned Residues77
% Identity30%Templatec3cmvG_
PDB info PDB header:recombinationChain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures
Resolution4.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250........ .260. ........270.........280.........290.........300...
Predicted Secondary structure 









.....


...













Query SS confidence 


























. . . . .


. . .









































Query Sequence  RTVAILGGESSGKSTLVNKLANIFNTT. . . . . SAW. . . EYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYAN
Query Conservation 
 
 
 
  






   

      ..... 
 ...
  
    
        
   
   
   
   
        
Alig confidence 


























.....


...









.






























Template Conservation 




















 





    



 





 
  
.


   
    
   

 
         
 
Template Sequence  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKL. GVDIDNLLCSQPDTGEQALEICDALARSGAV
Template Known Secondary structure  S
SSSSSTTS

SS



.T

GGG

SSSSS
Template Predicted Secondary structure 
















.












Template SS confidence 















































































   60.........70.........80.........90.........100....... ..110.........120.........130........
 
   304.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  KVAFID
Query Conservation    

 
Alig confidence 





Template Conservation    
 

Template Sequence  DVIVVD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   139140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions