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Job DescriptionP27278
Confidence98.59%DateThu Jan 5 11:43:37 GMT 2012
Rank101Aligned Residues165
% Identity15%Templatec3akyA_
PDB info PDB header:adenylate kinaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: stability, activity and structure of adenylate kinase2 mutants
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250......... 260.........270.........280... ......290.........300.....
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Query Sequence  TVAILGGESSGKSTLVNKLANIFNTTS. . AWEYGRDYVFSHLGGDEIALQYSD. . . . . YDKIALGHAQYIDFAVKYANKV
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Template Sequence  RMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKNG
Template Known Secondary structure 

TTSS

TT
TTT




GGGGS
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   306...310.........320.........330.........340.........350....
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Query Sequence  AFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FILDGFPRTIPQAEKLDQ. . . . . . . MLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVT
Template Known Secondary structure  S


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   86...90.........100... ......110.........120.........130.........140.........150........
 
   355....360.........370....... ..380....... ..390.........400....
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Query Sequence  . . . . GLRSLGSSVDRKEFQNLLVEMLE. . . . . . ENNIEFVRVE. EEDYDSRFLRCVELVRE
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Template Sequence  GEALVQRSDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADFLNKLGK
Template Known Secondary structure 

B
B

TT
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   159160.........170.........180.........190.........200.........210.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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