Job Description P27278 Confidence 99.48% Date Thu Jan 5 11:43:37 GMT 2012 Rank 37 Aligned Residues 175 % Identity 11% Template c2wwiC_ PDB info PDB header:transferase Chain: C: PDB Molecule:thymidilate kinase, putative; PDBTitle: plasmodium falciparum thymidylate kinase in complex with2 aztmp and adp Resolution 2.99 Å

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		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.															.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	N	T	T	S	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																								.	.
Template Sequence		K	F	I	V	F	E	G	L	D	R	S	G	K	S	T	Q	S	K	L	L	V	E	Y	L	K	N	N	N	V	E	V	K	H	L	Y	F	P	N	R	E	T	G	I	G	Q	I	I	S	K	Y	L	K	M	E	.	.	N	S	M	S	N	E	T	I	H	L	L	F	S	A	N	R	W	E	H	M	N	E	I	K
Template Known Secondary structure									S	T	T	S	S														T	T	T								S	S		T	T	S	T	T										T	S	.	.	S																	T	T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	V	K	Y	A	N	K	V	A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	.	R	F	D	L	V	I	L	L	E	N	N	T	P	W	V	A	D	G	L	R	S	L	G	S	S	V	D	R	K	E	F	Q	N	L	L	V	E	M	L
Query Conservation																																										.
Alig confidence																																										.																												.
Template Conservation																																																																						.
Template Sequence		S	L	L	L	K	G	I	W	V	V	C	D	R	Y	A	Y	S	G	V	A	Y	S	S	G	A	L	N	L	N	K	T	W	C	M	N	P	D	Q	G	L	I	K	P	D	V	V	F	Y	L	N	V	P	P	N	Y	A	Q	N	R	D	Y	G	E	E	I	Y	E	K	.	V	E	T	Q	K	K	I	Y	E	T	Y
Template Known Secondary structure							T																				S									T	T	T	T	T	S	B			S									T	T	T	G	G	G			T	T	S	S	T	T			.											G
Template Predicted Secondary structure																																																																						.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.
		377	.	.	380	.	.			.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.						.
Query SS confidence								.	.						.
Query Sequence		E	E	N	N	I	E	.	.	F	V	R	V	E	.	E	E	D	Y	D	S	R	F	L	R	C	V	E	L	V	R	E	M	M	G	E	Q
Query Conservation								.	.						.
Alig confidence								.	.						.
Template Conservation
Template Sequence		K	H	F	A	H	E	D	Y	W	I	N	I	D	A	T	R	K	I	E	D	I	H	N	D	I	V	K	E	V	T	K	V	E	P	E	E
Template Known Secondary structure		G	G	T	S	S	S	T	T						T	T	S																			B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions