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Job DescriptionP27278
Confidence96.45%DateThu Jan 5 11:43:37 GMT 2012
Rank309Aligned Residues105
% Identity16%Templatec2rcnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium.
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  VDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGI
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Template Sequence  IDQIVIVSAILP. . . . . . . . . . . . ELSLNIIDRY. LVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNI. . . . . .
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STT............T

.T

GGG

TT......
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   131........140.. .......150.. .......160.........170.........180.........190.
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  QPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNK
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Template Sequence  GYRVLMVSSHTQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGLKPLEEALTG. . . . . . . RISIFAGQSGVGKSSLLNA
Template Known Secondary structure  T


BTTTT..............................BTTT.......S

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   192.......200... ......210..... ....220.........230....
 
   251
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Query Sequence  L
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Template Sequence  L
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   235
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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