Job Description P27278 Confidence 99.25% Date Thu Jan 5 11:43:37 GMT 2012 Rank 48 Aligned Residues 178 % Identity 16% Template c2qroB_ PDB info PDB header:transferase Chain: B: PDB Molecule:deoxycytidine kinase; PDBTitle: human deoxycytidine kinase damp, udp, mg ion product complex Resolution 3.45 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																											.													.	.	.	.	.	.	.	.	.
Query SS confidence																											.													.	.	.	.	.	.	.	.	.
Query Sequence		V	R	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	.	N	T	T	S	A	W	E	Y	G	R	D	Y	.	.	.	.	.	.	.	.	.	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F	A	V	K
Query Conservation																											.													.	.	.	.	.	.	.	.	.
Alig confidence																											.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	K	I	S	I	E	G	N	I	A	A	G	K	S	T	F	V	N	I	L	K	Q	L	C	E	D	W	E	V	V	P	E	P	V	A	R	W	C	N	V	Q	S	N	G	G	N	V	L	Q	M	M	Y	E	K	P	E	R	W	S	F	T	F	Q	T	Y	A	C	L	S	R	I	R	A	Q	L	A	S	L	N
Template Known Secondary structure											T	T	S	S										T	T		T	T							T					T	S	S																																						T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		301	.												.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.										.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	.	.	.	.	.	.	.	.	.	.	.	N	K	V	A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	.	.	.	.	.	.	.	.	.	Y	R	F	D	L	V	I	L	L	E	N	N	T	P	W	V	A	D	G	L	R	S	L	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	L	K	D	A	E	K	P	V	L	F	F	E	R	S	V	Y	S	D	R	Y	I	F	A	S	N	L	Y	E	S	E	C	M	N	E	T	E	W	T	I	Y	Q	D	W	H	D	W	M	N	N	Q	F	G	Q	S	L	E	L	D	G	I	I	Y	L	Q	A	T	P	E	T	C	L	H	R	I	Y	L	R	G
Template Known Secondary structure		S	G	G	G	T	S	S	S							S								T								T	T		S																			S							S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		361	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.	.	.															380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		S	S	V	D	R	.	.	.	K	E	F	Q	N	L	L	V	E	M	L	E	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	E	F	V	R	V	E	E	E	.	D	Y	D	S	R	F	L	R	C	V	E	L	V	R	E	M	M	G	E
Query Conservation							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		R	N	E	E	Q	G	I	P	L	E	Y	L	E	K	L	H	Y	K	H	E	S	W	L	L	H	R	T	L	K	T	N	F	D	Y	L	Q	E	V	P	I	L	T	L	D	V	N	E	D	F	K	D	K	Y	E	S	L	V	E	K	V	K	E	F	L	S	T
Template Known Secondary structure			G	G	G	G	S																		T	S						S		G	G	G	G	G								T	T	S		T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions