Job Description P27278 Confidence 96.49% Date Thu Jan 5 11:43:37 GMT 2012 Rank 299 Aligned Residues 139 % Identity 13% Template c2q6tB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																																																	.
Query SS confidence																								.	.	.	.	.	.	.																																																	.
Query Sequence		V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	.	.	.	.	.	.	.	N	T	T	S	A	W	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F	A	V	K	Y	A	N	.	K	V
Query Conservation																								.	.	.	.	.	.	.																																																	.
Alig confidence																								.	.	.	.	.	.	.																																																	.
Template Conservation
Template Sequence		N	I	I	A	A	R	P	A	M	G	K	T	A	F	A	L	T	I	A	Q	N	A	A	L	K	E	G	V	G	V	G	I	Y	S	L	E	M	P	A	A	Q	L	T	L	R	M	M	C	S	E	A	R	I	D	M	N	R	V	R	L	T	D	R	D	F	S	R	L	V	D	V	A	S	R	L	S	E	A	P	I
Template Known Secondary structure								T	T	S	S																S										S	S														T	T			G	G	G	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	R	F	D	L	V	I	L	L	E	N	N	T	P	W	V	A	D	G	L	R	S	L	G	S	S	V	D	R	K	E	F	Q	N	L	L	V	E	M	L	E	E	N	N	I	E	F	V	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		Y	I	D	D	T	P	D	L	T	.	.	.	.	.	.	.	.	L	M	E	V	R	A	R	A	R	R	L	V	S	Q	N	Q	V	G	L	I	I	I	D	Y	L	.	.	.	.	.	.	Q	L	M	S	G	P	N	R	Q	Q	E	I	A	A	I	S	R	G	L	K	A	L	A	R	E	L	G	I	P	I	I	A
Template Known Secondary structure							T	T		B	.	.	.	.	.	.	.	.																									G	.	.	.	.	.	.	G	G		B																							T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.									.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		386
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions