Job Description P27278 Confidence 98.93% Date Thu Jan 5 11:43:37 GMT 2012 Rank 61 Aligned Residues 151 % Identity 13% Template c2pt5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:shikimate kinase; PDBTitle: crystal structure of shikimate kinase (aq_2177) from aquifex aeolicus2 vf5 Resolution 2.10 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	N	T	T	S	A	W	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F	A	V	K	Y	A	N	K	V	A	F	I	D	T	D	F
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		R	I	Y	L	I	G	F	X	C	S	G	K	S	T	V	G	S	L	L	S	R	S	L	N	I	P	F	Y	D	.	.	V	D	E	E	V	Q	K	R	E	G	L	S	I	P	Q	I	F	E	K	K	G	E	A	Y	F	R	K	L	E	F	E	V	L	K	D	L	S	E	K	E	N	V	V	I	S	T	G	G	G
Template Known Secondary structure									G	G	G														T						.	.										T																											T	T	S	S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	R	F	D	L	V	I	L	L	E	N	N	T	P	W	V	A	D	G	L	R	S	L	G	S	S	V	D	R	K	E	F	Q	N	L	L	V	E	M	L	E	E	N	N	I	E	F	V	R	V	E	.	E	E	D	Y
Query Conservation																																																																													.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.	.																								.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.	.
Template Sequence		L	G	A	.	.	.	.	.	.	.	.	.	.	.	N	E	E	A	L	N	F	X	K	S	R	.	.	G	T	T	V	F	I	D	I	P	F	E	V	F	L	E	R	C	R	P	.	.	.	.	.	.	L	D	E	I	K	N	L	F	E	E	R	R	K	I	Y	S	K	A	D	I	K	V	K	G	E	K	P	P
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.												.	.	S																			.	.	.	.	.	.																T	T	S	S						S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.	.
Template SS confidence
		80	.	.												.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		392	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	R	F	L	R	C	V	E	L	V	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	V	V	K	E	I	L	L	S	L	E	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions