Job Description P27278 Confidence 99.49% Date Thu Jan 5 11:43:37 GMT 2012 Rank 36 Aligned Residues 304 % Identity 15% Template c2gksB_ PDB info PDB header:transferase Chain: B: PDB Molecule:bifunctional sat/aps kinase; PDBTitle: crystal structure of the bi-functional atp sulfurylase-aps kinase from2 aquifex aeolicus, a chemolithotrophic thermophile Resolution 2.31 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																																														.	.	.
Query SS confidence																		.																																														.	.	.
Query Sequence		Y	P	L	H	T	G	H	I	Y	L	I	Q	R	A	C	S	.	Q	V	D	E	L	H	I	I	M	G	F	D	D	T	R	D	R	A	L	F	E	D	S	A	M	S	Q	Q	P	T	V	P	D	R	L	R	W	L	L	Q	T	F	K	Y	Q	.	.	.	K	N	I	R	I	H	A	F	N	E	E	G	M	E	P
Query Conservation																		.																																														.	.	.
Alig confidence																		.														.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	M	H	R	V	H	E	E	L	T	K	R	A	M	E	K	V	G	G	G	L	L	L	H	P	V	V	G	L	.	.	.	.	.	.	.	.	.	.	T	K	P	G	D	V	D	V	Y	T	R	M	R	I	Y	K	V	L	Y	E	K	Y	Y	D	K	K	K	T	I	L	A	F	L	P	L	A	M	R	M	A
Template Known Secondary structure		S																		T	S							B		S	B	.	.	.	.	.	.	.	.	.	.			T	T																			S		T	T	T						B			B
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.											.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																				.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		Y	P	H	G	W	D	V	W	S	N	G	I	K	K	F	M	A	E	K	G	I	Q	P	D	L	I	Y	T	S	E	E	A	D	A	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	E	H	L	G	I	E	T	V	L	V	D	.	.	.	.	.	P	K	R	T	F	M	S
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence					.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		G	P	R	.	.	.	.	.	E	A	L	W	H	G	I	I	R	R	N	Y	G	A	T	H	F	I	V	G	R	D	H	A	S	P	G	K	D	S	K	G	K	P	F	Y	D	P	Y	E	A	Q	E	L	F	K	K	Y	E	D	E	I	G	I	K	M	V	P	F	E	E	L	V	Y	V	P	E	L	D	Q	Y	V
Template Known Secondary structure					.	.	.	.	.												T	T		S						T	T	T	T				B		T	T	S		B	S	S		T	T														T													T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		243	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.											.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.
Predicted Secondary structure																.	.	.	.														.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Query SS confidence																.	.	.	.														.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Query Sequence		I	S	G	A	Q	I	R	E	N	P	F	R	Y	W	.	.	.	.	E	Y	I	P	T	E	V	K	P	F	F	V	R	.	.	.	.	.	.	.	.	.	.	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	N	T	T	S	A	W	.	.	.	.	.	.	E	Y	G	R
Query Conservation																.	.	.	.														.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Alig confidence																.	.	.	.														.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	N	E	I	R	E	N	F	L	K	Q	G	R	K	L	P	E	W	F	T	R	P	E	V	A	E	I	L	A	E	T	Y	V	P	K	H	K	Q	G	F	C	V	W	L	T	G	L	P	C	A	G	K	S	T	I	A	E	I	L	A	T	M	L	Q	A	R	G	R	K	V	T	L	L	D	G	D	V	V	R
Template Known Secondary structure			S				T	T	T	T	S	S	S						T	T	T	S												S			G	G	G	S									S	T	T	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F	A	V	K	Y	A	N	K	V	A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	R	F	D	L	V	I	L	L
Query Conservation
Alig confidence						.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	L	S	.	.	.	.	.	.	R	G	L	G	F	S	K	E	D	R	I	T	N	I	L	R	V	G	F	V	A	S	E	I	V	K	H	N	G	V	V	I	C	A	L	V	S	P	Y	R	S	A	R	N	Q	V	.	.	.	.	.	.	.	.	.	.	R	N	M	M	E	E	G	K	F	I	E	V	F	V
Template Known Secondary structure				T	S	.	.	.	.	.	.	T	T			S	S																					T	T																			.	.	.	.	.	.	.	.	.	.		T	T	S		T	T
Template Predicted Secondary structure						.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		413	.	.	.							.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.											.	.	.	.	.	.	.	470	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.
Predicted Secondary structure																														.	.	.																	.	.																.	.
Query SS confidence																														.	.	.																	.	.																.	.
Query Sequence		E	N	N	T	P	W	V	A	D	G	L	R	S	L	G	S	S	V	D	R	K	E	F	Q	N	L	L	V	.	.	.	E	M	L	E	E	N	N	I	E	F	V	R	V	E	E	E	.	.	D	Y	D	S	R	F	L	R	C	V	E	L	V	R	E	.	.	M	M	G	E
Query Conservation																														.	.	.																	.	.																.	.
Alig confidence																														.	.	.																	.	.																.	.
Template Conservation
Template Sequence		D	A	P	V	E	V	C	E	E	R	D	V	K	G	L	Y	K	K	A	K	E	G	L	I	K	G	F	T	G	V	D	D	P	Y	E	P	P	V	A	P	E	V	R	V	D	T	T	K	L	T	P	E	E	S	A	L	K	I	L	E	F	L	K	K	E	G	F	I	K	D
Template Known Secondary structure					T	T		T	T	T	T	T																		S									S	S		S					T	T	T	S																	T	S
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions