Return to main results Retrieve Phyre Job Id

Job DescriptionP27278
Confidence96.74%DateThu Jan 5 11:43:37 GMT 2012
Rank268Aligned Residues42
% Identity14%Templatec2chgB_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c domains 1 and 2
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220.........230.........240.........250.........260.
Predicted Secondary structure 

















Query SS confidence 









































Query Sequence  EYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAW
Query Conservation    

  

    
 
 
 
  






   

       
 
Alig confidence 









































Template Conservation    
   
        

 

 
 


 

  

 
       
Template Sequence  QRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENWR
Template Known Secondary structure  TT


S
TTSSGGGTG
Template Predicted Secondary structure 
















Template SS confidence 









































   27..30.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions