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Job DescriptionP27278
Confidence95.85%DateThu Jan 5 11:43:37 GMT 2012
Rank392Aligned Residues105
% Identity17%Templatec1u0lB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of yjeq from thermotoga maritima
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  VDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGI
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Template Sequence  VDQVILVVT. . . . . . . . . . . . . VKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDD. . . . . . LRKVRELEEIYSG
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GGG

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   379380....... ..390.........400.........410.........420...... ...430.........
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  QPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNK
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Template Sequence  LYPIVKTSAKTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MGIEELKEYLKG. . . . . . . KISTMAGLSGVGKSSLLNA
Template Known Secondary structure  TS


TTT
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   440.........450. ........460... ......470.........480..
 
   251
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Query Sequence  L
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Template Conservation 
Template Sequence  I
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   483
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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