Job Description P27278 Confidence 99.50% Date Thu Jan 5 11:43:37 GMT 2012 Rank 35 Aligned Residues 316 % Identity 16% Template c1m8pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sulfate adenylyltransferase; PDBTitle: crystal structure of p. chrysogenum atp sulfurylase in the t-state Resolution 2.60 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		K	T	I	G	V	V	F	G	K	F	Y	P	L	H	T	G	H	I	Y	L	I	Q	R	A	C	S	Q	.	V	D	E	L	H	I	I	M	G	F	D	D	T	R	D	R	A	L	F	E	D	S	A	M	S	Q	Q	P	T	V	P	D	R	L	R	W	L	L	Q	T	F	K	Y	Q	K	N	I	R	I	H	A	F
Query Conservation																													.
Alig confidence					.																								.													.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	V	.	V	A	F	Q	T	R	N	P	M	H	R	A	H	R	E	L	T	V	R	A	A	R	S	R	Q	A	N	V	L	I	H	P	V	V	G	L	.	.	.	.	.	.	.	.	.	.	T	K	P	G	D	I	D	H	F	T	R	V	R	A	Y	Q	A	L	L	P	R	Y	P	N	G	M	A	V	L	G
Template Known Secondary structure					.						S	S																	T	T											S	.	.	.	.	.	.	.	.	.	.			T	T															G	G	G	S		T	T	T
Template Predicted Secondary structure					.																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.											230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																				.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		N	E	E	G	M	E	P	Y	P	H	G	W	D	V	W	S	N	G	I	K	K	F	M	A	E	K	G	I	Q	P	D	L	I	Y	T	S	E	E	A	D	A	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	E	H	L	G	I	E	T	V	L	V	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		L	L	G	L	A	M	R	M	G	G	P	R	E	.	.	.	A	I	W	H	A	I	I	R	K	N	H	G	A	T	H	F	I	V	G	R	D	H	A	G	P	G	S	N	S	K	G	E	D	F	Y	G	P	Y	D	A	Q	H	A	V	E	K	Y	K	D	E	L	G	I	E	V	V	E	F	Q	M	V	T	Y	L
Template Known Secondary structure		B													.	.	.											T	T		S						T	T	T	T				B		T	T	S		B	S	S		T	T														T											B	B
Template Predicted Secondary structure															.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
														198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.											.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	P	K	R	T	F	M	S	I	S	G	A	Q	I	R	E	N	P	F	R	Y	W	.	.	.	.	E	Y	I	P	T	E	V	K	P	F	F	V	R	.	.	.	.	.	.	.	.	.	.	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	T	D	E	Y	R	P	V	D	Q	V	P	A	G	V	K	T	L	N	I	S	G	T	E	L	R	R	R	L	R	S	G	A	H	I	P	E	W	F	S	Y	P	E	V	V	K	I	L	R	E	S	N	P	P	R	A	T	Q	G	F	T	I	F	L	T	G	Y	M	N	S	G	K	D	A	I	A	R	A	L
Template Known Secondary structure		T	T	T	T	B				S	S	S	S		T	T	S			B														T					T	T	T	S										T	T	S			T	T	T										S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		252	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		A	N	I	F	.	.	.	N	T	T	S	A	W	E	Y	G	R	D	Y	V	F	S	H	L	G	G	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	H	A	Q	Y	I	D	F	A	V	K	Y	A	N	K	V	A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P
Query Conservation						.	.	.
Alig confidence						.	.	.																									.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.																																						.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	T	L	N	Q	Q	G	G	R	S	V	S	L	L	L	G	D	T	V	R	H	E	L	S	S	E	L	G	F	T	.	.	R	E	D	R	H	T	N	I	Q	R	I	A	F	V	A	T	E	L	T	R	A	G	A	A	V	I	A	A	P	I	A	P	Y	E	E	S	R	.	.	.	.	.	.	.	.	.	K
Template Known Secondary structure										S	S														T		T	T				S	.	.																					T	T																.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.										.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																														.	.	.																		.	.
Query SS confidence																																														.	.	.																		.	.
Query Sequence		F	V	Q	A	L	I	D	E	Y	R	F	D	L	V	I	L	L	E	N	N	T	P	W	V	A	D	G	L	R	S	L	G	S	S	V	D	R	K	E	F	Q	N	L	L	.	.	.	V	E	M	L	E	E	N	N	I	E	F	V	R	V	E	E	E	.	.	D	Y	D	S	R	F	L	R	C	V	E	L	V	R
Query Conservation																																														.	.	.																		.	.
Alig confidence																																														.	.	.																		.	.
Template Conservation
Template Sequence		F	A	R	D	A	V	S	Q	A	G	S	F	F	L	V	H	V	A	T	P	L	E	H	C	E	Q	S	D	K	R	G	I	Y	A	A	A	R	R	G	E	I	K	G	F	T	G	V	D	D	P	Y	E	T	P	E	K	A	D	L	V	V	D	F	S	K	Q	S	V	R	S	I	V	H	E	I	I	L	V	L	E
Template Known Secondary structure									T	T	S																			S	S								T	T	S	S	S	S		B	T	T	T	B						S	S		S					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		404
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		566

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions