Job Description P27278 Confidence 98.66% Date Thu Jan 5 11:43:37 GMT 2012 Rank 95 Aligned Residues 172 % Identity 10% Template c1ankA_ PDB info PDB header:transferase(phosphotransferase) Chain: A: PDB Molecule:adenylate kinase; PDBTitle: the closed conformation of a highly flexible protein: the2 structure of e. coli adenylate kinase with bound amp and3 amppnp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.										.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																.	.														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	V	A	I	L	G	G	E	S	S	G	K	S	T	L	V	N	K	L	A	N	I	F	N	T	T	S	A	W	.	.	E	Y	G	R	D	Y	V	F	S	H	L	G	G	.	.	.	.	.	.	.	.	.	D	E	I	A	L	Q	Y	S	D	Y	D	K	I	A	L	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	I	I	L	L	G	A	P	G	A	G	K	G	T	Q	A	Q	F	I	M	E	K	Y	G	I	P	Q	I	S	T	G	D	M	L	R	A	A	V	K	S	G	S	E	L	G	K	Q	A	K	D	I	M	D	A	G	K	L	V	T	D	E	L	V	I	A	L	V	K	E	R	I	A	Q	E	D	C	R	N	G
Template Known Secondary structure										T	T	S	S																														T		T	T	T	T	T								T																T	T	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
												291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	H	A	Q	Y	I	D	F	A	V	K	Y	A	N	K	V	A	F	I	D	T	D	F	V	T	T	Q	A	F	C	K	K	Y	E	G	R	E	H	P	F	V	Q	A	L	I	D	E	Y	.	R	F	D	L	V	I	L	L	E	N	N	T	P	.	W	V	A	D	G	L	R	S
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																.														.
Template Conservation
Template Sequence		F	L	L	D	G	F	P	R	T	I	P	Q	A	D	A	M	K	E	A	G	I	N	V	D	Y	V	L	E	F	D	V	P	D	E	L	I	V	D	R	I	V	G	R	R	V	H	A	P	S	G	R	V	Y	H	V	K	F	N	P	P	K	V	E	G	K	D	D	V	T	G	E	E	L	T	T	R	K	D	D	Q
Template Known Secondary structure						S				S							T	T	T	T	T				S									G	G	G							T					T	T	T	T					T	T	T	B			S	S	T	T	B		T	T	T			B		B			T	T		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		359	360	.	.	.	.	.	.	.	.									.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																						.
Query SS confidence												.	.	.	.	.	.	.	.																						.
Query Sequence		L	G	S	S	V	D	R	K	E	F	.	.	.	.	.	.	.	.	Q	N	L	L	V	E	M	L	E	E	N	N	I	E	F	V	R	V	E	E	E	.	D	Y	D	S	R	F	L	R	C	V	E	L	V	R	E	M	M	G
Query Conservation												.	.	.	.	.	.	.	.																						.
Alig confidence												.	.	.	.	.	.	.	.																						.						.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		E	E	T	V	R	K	R	L	V	E	Y	H	Q	M	T	A	P	L	I	G	Y	Y	S	K	E	A	E	A	G	N	T	K	Y	A	K	V	D	G	T	K	P	V	A	E	V	.	.	.	.	R	A	D	L	E	K	I	L	G
Template Known Secondary structure																T	T													T	S								T	T	S						.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions