Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFK9
Confidence74.34%DateThu Jan 5 11:26:37 GMT 2012
Rank94Aligned Residues201
% Identity7%Templatec3un6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein saouhsc_00137; PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40........ .50.........60.........70.........80.........90.........100
Predicted Secondary structure 







.....
















Query SS confidence 






















. . . . .



















































Query Sequence  NNTLYFYNWTEYVPPGLLEQFTK. . . . . ETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKID
Query Conservation    

 
           
  

 .....  

 
                       

                     
Alig confidence 






















.....
























...






















.
Template Conservation     




 
     
   
 
  
 
   

 

            

  
 ...

 
             
     .
Template Sequence  QQVIKIGYLPITHSANLXXTKKLLSQYNHPKYKLELVKFNNWPDLXDALNSGR. . . IDGASTLIELAXKSKQKGSNIKA.
Template Known Secondary structure 


SSGGGTSSS
SS
SSTTS...SSTT


.
Template Predicted Secondary structure 












...







.
Template SS confidence 















































































   34.....40.........50.........60.........70.........80...... ...90.........100.........
 
   101........110.........120.........130.........140.........150.........160.........170.........180
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  KSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKL
Query Conservation                       
  
  
         

                                         
Alig confidence  .........................















....


































Template Conservation  .........................            
   ....       
 
 

 
            
   
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . VALGHHEGNVIXGQKG. . . . XHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQL
Template Known Secondary structure  .........................S

STT....

GGG

SSSS
S
SSST
Template Predicted Secondary structure  .........................








....














Template SS confidence 















































































   110.........120..... ....130.........140.........150.........160
 
   181........190.........200.........210.........220.........230.........240.........250.........260
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLA
Query Conservation 
             
   
  
               
  
  
                       
            
Alig confidence 







.................






















































Template Conservation 

   

 ................. 
         

  
 


    

                             
Template Sequence  KIKPGHFS. . . . . . . . . . . . . . . . . YHEXSPAEXPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVL
Template Known Secondary structure  T

TTS.................

GGGTTS
STTSS

GGGTSTT


Template Predicted Secondary structure 






.................






















Template SS confidence 















































































   161....... .170.........180.........190.........200.........210.........220...
 
   261... .....270......
Predicted Secondary structure 

...


Query SS confidence 



. . .











Query Sequence  IPAN. . . AKNKEGALKLIN
Query Conservation 
   ...
   
 
  

 
Alig confidence 



...











Template Conservation            

 
  
  
Template Sequence  VLRGELLDQHKDVAQAFVQ
Template Known Secondary structure 

Template Predicted Secondary structure 



Template SS confidence 


















   224.....230.........240..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions