Job Description P0AFK9 Confidence 99.58% Date Thu Jan 5 11:26:37 GMT 2012 Rank 75 Aligned Residues 224 % Identity 12% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		27	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		N	T	L	Y	F	Y	N	W	T	E	Y	.	.	.	.	V	P	P	G	L	L	E	Q	F	T	K	E	T	G	I	K	V	I	Y	S	T	Y	E	S	N	E	T	M	Y	A	K	L	K	T	Y	K	D	G	A	Y	D	L	V	V	P	S	T	Y	Y	V	D	K	M	R	K	E	G	M	I	Q	K	I	D	K	S
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																																	.	.	.																										.	.	.	.	.
Template Conservation																																																	.	.	.																										.	.	.	.	.
Template Sequence		E	H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	I	A	A	G	T	G	K	A	L	K	X	G	E	.	.	.	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	.	.	.	.	.
Template Known Secondary structure																T	G	G	G	G	T																												.	.	.	T	T	S	S	S																T	T	S			.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.																										.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	N	F	S	N	L	D	P	D	M	L	N	K	P	F	D	P	N	N	D	Y	S	I	P	Y	I	W	G	A	T	A	I	G	V	N	G	D	A	V	D	P	K	S	V	T	S	W	A	D	L	W	K	P	E	Y	K	G	S	L	L	L	T	D	D	A	R	E	V	F	Q	M	A	L	R	K	L	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																																						.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	R	K	L	X	Y	N	D	F	V	I	V	G	P	K	A	.	.	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	.	.		T	T			T	T		S												T	T								S		S						.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																																						.	.
Template SS confidence
																								99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	N	T	T	D	P	K	E	I	E	A	A	Y	N	E	L	K	K	L	M	P	N	V	A	A	F	N	S	D	N	P	A	N	P	Y	M	E	G	E	V	N	L	G	M	I	W	N	G	S	A	F	V	A	R	Q	A	G	T	P	I	D	V	V	W	P	K	E	G	G	I	F	W	M	D	S	L	A	I	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	X	G	F	W	A	Q	T	K	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	A	S	E	X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V
Template Known Secondary structure		.	.	.	.	.	.	.									T					S	T	T																			T														G	G	G		S									G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		263	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		A	N	.	.	.	.	A	K	N	K	E	G	A	L	K	L	I	N	F	L	L	R	P	D	V	A	K	Q	V	A	E	T	I
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D	W	L	V	N	P	R	G	Q	E	L	I	N	G	F	R
Template Known Secondary structure			T	T	T		T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions