Job Description P0AFK9 Confidence 100.00% Date Thu Jan 5 11:26:37 GMT 2012 Rank 24 Aligned Residues 321 % Identity 18% Template c3k02A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:acarbose/maltose binding protein gach; PDBTitle: crystal structures of the gach receptor of streptomyces glaucescens2 gla.o in the unliganded form and in complex with acarbose and an3 acarbose homolog. comparison with acarbose-loaded maltose binding4 protein of salmonella typhimurium. Resolution 1.55 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.												.																					.	.
Query SS confidence																.	.	.	.												.																					.	.
Query Sequence		N	N	T	L	Y	F	Y	N	W	T	E	Y	V	P	.	.	.	.	P	G	L	L	E	Q	F	T	K	E	T	.	G	I	K	V	I	Y	S	T	Y	E	S	N	E	T	M	Y	A	K	L	K	.	.	T	Y	K	D	G	A	Y	D	L	V	V	P	S	T	Y	Y	V	D	K	M	R	K	E	G	M	I	Q	K
Query Conservation																.	.	.	.												.																					.	.
Alig confidence																.	.	.	.												.																					.	.
Template Conservation
Template Sequence		S	G	T	V	T	F	W	D	T	S	N	E	A	E	K	A	T	Y	Q	A	L	A	E	G	F	E	K	E	H	P	K	V	D	V	K	Y	V	N	V	P	F	G	E	A	N	A	K	F	K	N	A	A	G	G	N	S	G	A	P	D	V	M	R	T	E	V	A	W	V	A	D	F	A	S	I	G	Y	L	A	P
Template Known Secondary structure													T	T	T																T	T																							T	T	S	S			S						T	T								T	T		B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		99	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.											.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure					.																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	K	.	S	K	L	T	N	F	S	N	L	D	P	D	M	L	N	K	P	F	D	P	N	N	D	Y	S	I	P	Y	I	W	G	A	T	A	I	G	V	N	G	D	A	V	D	P	K	S	V	T	S	W	A	D	L	W	K	.	.	.	.	.	.	.	.	.	.	P	E	Y	K	G	S	L	L	L	T	D
Query Conservation					.																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	G	T	P	A	L	D	D	G	S	D	H	L	P	Q	A	A	A	S	T	R	Y	E	G	K	T	Y	A	V	P	Q	V	I	D	T	L	A	L	F	Y	N	K	E	L	L	T	K	A	G	V	E	V	P	G	S	V	A	E	L	K	T	A	A	A	E	I	T	E	K	T	G	A	T	G	L	Y	L	R	G
Template Known Secondary structure			T	T	S	T	T		S	S	G	G	G	B							T	T			T	T																									T					S	B																S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		D	A	R	E	V	F	Q	M	A	L	R	K	L	G	Y	S	G	N	T	.	.	.	.	.	.	.	T	D	P	K	E	I	E	A	A	Y	N	E	L	K	K	L	M	P	N	V	.	.	.	.	.	A	A	F	N	S	D	N	P	A	N	P	Y	M	E	G	E	V	N	L	G	M	I	W	N	G	S	A	F	V
Query Conservation																					.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		D	D	P	Y	W	F	L	P	Y	L	Y	G	E	G	G	D	L	V	D	E	K	N	K	T	V	T	V	D	D	E	A	G	V	R	A	Y	R	V	I	K	D	L	V	D	S	K	A	A	I	T	D	A	S	D	G	W	N	N	M	Q	N	A	F	K	S	G	K	V	A	M	M	V	N	G	P	W	A	I	E	D
Template Known Secondary structure		S		G	G	G	G							T	T			S			T	T	T	T				T	T	S																T	T	S					S	S												T	T	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	A	G	T	P	I	D	.	.	.	.	.	.	.	.	.	.	V	V	W	P	K	E	G	G	I	F	W	M	D	S	L	A	I	P	A	N	A	K	N	K	E	G	A	L	K	L	I	N	F	L	L	R	P	D	V	A	K	Q	V	A	E	T	I	G	Y	P	T	P	N	L	A	A	R	K	L	L	S
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																																											.	.
Template Conservation																																																																															.	.
Template Sequence		V	K	A	G	A	R	F	K	D	A	G	N	L	G	V	A	P	V	P	A	G	S	A	G	Q	G	S	P	Q	G	G	W	N	L	S	V	Y	A	G	S	K	N	L	D	A	S	Y	A	F	V	K	Y	M	S	S	A	K	V	Q	Q	Q	T	T	E	K	L	S	L	L	P	T	R	T	S	V	Y	E	.	.	V
Template Known Secondary structure				T	S	G	G	G	S	S	G	G	G								B		S	S					B									B	T	T		S													T	S																S	B	G	G	G	G	G	.	.	S
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		P	E	V	A	N	D	K	T	L	Y	P	D	A	E	T	I	K	N	G	E	W	Q	N	D	V	.	.	.	G	A	A	S	S	I	Y	E	E	Y	Y	Q	K	L	K	A	G	R
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		P	S	V	A	D	N	E	M	V	K	F	F	K	P	A	V	D	K	A	V	E	R	P	W	I	A	E	G	N	A	L	F	E	P	I	R	L	Q	M	A	N	V	L	S	G	E
Template Known Secondary structure						T															B						T	T	S	G	G	G														T	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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