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Job DescriptionP0AFK9
Confidence100.00%DateThu Jan 5 11:26:37 GMT 2012
Rank20Aligned Residues313
% Identity17%Templatec3csgA_
PDB info PDB header:de novo protein, sugar binding proteinChain: A: PDB Molecule:maltose-binding protein monobody ys1 fusion; PDBTitle: crystal structure of monobody ys1(mbp-74)/maltose binding2 protein fusion complex
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   28.30......... 40.........50.........60.........70.........80.........90.........100....
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Query Sequence  TLYFYNWTEYVP. . . PGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKL
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Template Sequence  KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDG. PDIIFWAHDRFGGYAQSGLLAEITPD. K
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   6...10.........20.........30.........40.........50...... ...60.........70.........80.. .
 
   105....110.........120.........130.........140.........150...... ...160.........170........
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Query Sequence  TNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWK. . . . . . PEYKGSLLLTDDAREVFQMALR
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Template Sequence  AFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP. PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIA
Template Known Secondary structure  TTB
TTTT
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SBGGGTTT



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   84.....90.........100.........110.........120..... ....130.........140.........150.........160..
 
   179180...... ...190.........200...... ...210.........220.........230.........240...
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Query Sequence  KLGYSGNT. . . . . . . . . . . . TDPKEIEAAYNELKKLMPNV. . . AAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAGTPI
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Template Sequence  ADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNY
Template Known Secondary structure  TT

SSSSSSTTSS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   244... ..250.........260.........270...... ...280.........290.........300.........310......
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Query Sequence  DVVW. . . . . . PKEGGIFWMDSLAIPANAKNKEGALKLIN. FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYP
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Template Sequence  GVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYE. . . EELAKDPRIAA
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   243......250.........260.........270.........280.........290.........300........ .310.........
 
   317..320.........330.........340......
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Query Sequence  DAETIKNGEWQNDVGAASSIYEEYYQKLKA
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Template Sequence  TMENAQKGEIMPNIPQMSAFWYAVRTAVIN
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   320.........330.........340.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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