Job Description P0A6U8 Confidence 99.62% Date Thu Jan 5 11:03:56 GMT 2012 Rank 43 Aligned Residues 150 % Identity 16% Template c3qhpB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type 1 capsular polysaccharide biosynthesis protein j PDBTitle: crystal structure of the catalytic domain of cholesterol-alpha-2 glucosyltransferase from helicobacter pylori Resolution 1.50 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	A	V	V	S	R	L	T	S	Q	K	G	L	D	L	V	L	E	A	L	P	G	L	L	E	Q	G	G	Q	L	A	L	L	G	A	G	D	P	V	L	Q	E	G	F	L	A	A	A	A	E	Y	P	G	Q	V	G	V	Q	I	G	Y	H	E	A	F	S	H	R	I	M	G	G	A	D	V	I	L	V
Query Conservation
Alig confidence																																																												.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		F	K	I	A	M	V	G	R	Y	S	N	E	K	N	Q	S	V	L	I	K	A	V	A	L	S	K	Y	K	Q	D	I	V	L	L	L	K	G	K	G	P	D	E	K	K	I	K	L	L	A	Q	K	L	G	V	K	A	E	F	.	.	.	.	.	.	G	F	V	L	L	E	I	L	K	T	C	T	L	Y	V	H
Template Known Secondary structure								S			S	T	T	T												S	T	T	G	G	G									S	T	T												T						.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	F	E	P	C	G	L	T	Q	L	Y	G	L	K	Y	G	T	L	P	L	V	R	R	T	G	G	L	A	D	T	V	S	D	C	S	L	E	N	L	A	D	G	V	A	S	G	F	V	F	E	D	S	N	A	W	S	L	L	R	A	I	R	R	A	F	V	L	W	S	R	P	S	L	W	R	F	V	Q
Query Conservation
Alig confidence									.	.																												.	.	.	.	.	.	.	.	.
Template Conservation									.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		A	A	N	V	E	A	I	.	.	A	C	L	E	A	I	S	V	G	I	V	P	V	I	A	N	S	P	L	S	A	T	R	Q	F	A	L	.	.	.	.	.	.	.	.	.	D	E	R	S	L	F	E	P	N	N	A	K	D	L	S	A	K	I	D	W	W	L	E	N	K	L	E	R	E	R	M	Q	N	E	Y
Template Known Secondary structure				S					.	.								T	T									T	T		T	T	G	G	G		S	.	.	.	.	.	.	.	.	.	S	G	G	G				T	T
Template Predicted Secondary structure									.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.										.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		453	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	A	M	A	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	S	A	L	N	Y
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions