Job Description P0A6U8 Confidence 99.86% Date Thu Jan 5 11:03:56 GMT 2012 Rank 31 Aligned Residues 371 % Identity 16% Template c3othB_ PDB info PDB header:transferase/antibiotic Chain: B: PDB Molecule:calg1; PDBTitle: crystal structure of calg1, calicheamicin glycostyltransferase, tdp2 and calicheamicin alpha3i bound form Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	V	L	H	V	C	S	E	M	F	P	L	L	K	T	G	G	L	A	D	V	I	G	A	L	P	A	A	Q	I	A	D	G	V	D	A	R	V	L	L	P	A	F	P	D	I	R	R	G	V	T	D	A	Q	V	V	S	R	R	D	T	F	A	G	H	I	T	L	L	F	G	H	Y	N	G	V	G	I	Y
Query Conservation
Alig confidence										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	V	L	F	A	S	L	.	.	.	.	.	.	G	T	H	G	H	T	Y	P	L	L	P	L	A	T	A	A	R	A	A	G	H	E	V	T	F	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	G	F	A	G	T	L	R	K	L	G	F	E	P	V
Template Known Secondary structure										.	.	.	.	.	.	S	S					G	G	G										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G							T	T
Template Predicted Secondary structure										.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.							.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
		81	.	.											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	D	.	.	.	.	.	.	.	.	.	.	A	P	H	L	Y	D	R	P	G	S	P	Y	H	D	T	N	L	F	A	Y	T	D	N	V	L	R	F	A	L	L	G	W	V	G	A	E	M	A	S	G	L	D	P	F	W	R	P	D	V	V	H	A	H	D	W	H	A	G	L	A	P	A	Y	L	A	A	R
Query Conservation					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	G	X	P	V	F	D	G	F	L	A	A	L	R	I	R	F	D	T	D	S	P	E	G	L	T	P	E	Q	L	S	E	L	P	Q	I	V	F	G	R	V	I	P	Q	R	V	F	D	E	L	Q	P	V	I	E	R	L	R	P	D	L	V	V	Q	E	I	S	N	Y	G	A	G	L	A	A	L	K	A	G
Template Known Secondary structure				S																S		S			T	T							T	T								T																				S						T	T												T
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	A	K	S	V	F	T	V	H	N	L	A	Y	Q	G	M	F	Y	A	H	H	M	N	D	I	Q	L	P	W	S	F	F	N	I	H	G	L	E	F	N	G	Q	I	S	F	L	K	A	G	L	Y	Y	A	D	H	I	T	A	V	S	P	T	Y	A	R	E	I	T	E	P	Q	F	A	Y	G	M	E	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	T	I	C	H	G	V	G	R	D	T	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	T	R	S	I	E	E	E	V	R	G	L	A	Q	R	L	G	L	D	L
Template Known Secondary structure										S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.																																														.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	Q	R	H	R	E	G	R	L	S	G	V	L	N	G	V	D	E	K	I	W	S	P	E	T	D	L	L	L	A	S	R	Y	T	R	D	T	L	E	D	K	A	E	N	K	R	Q	L	Q	I	A	M	G	L	K	V	D	D	K	V	P	L	F	A	V	V	S	R	L	T	S	Q	K	G	L	D	L	V
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		P	P	G	R	I	D	G	F	G	N	P	F	I	D	I	F	P	P	S	L	Q	E	P	E	F	R	A	R	P	R	R	H	E	L	R	P	V	P	F	A	E	Q	G	D	L	P	A	W	L	S	.	.	.	.	.	.	S	R	D	T	A	R	P	L	V	Y	L	T	L	G	T	S	S	G	G	T	V	E	V	L
Template Known Secondary structure			S	S			G	G	G	G							S		T	T	T	S						T		T	T																	G	G	G	G	.	.	.	.	.	.	G	S		T	T	S								T	T	T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	L	P	G	L	L	E	Q	G	G	Q	L	A	L	L	G	A	G	D	P	V	L	Q	E	G	F	L	A	A	A	A	E	Y	P	G	Q	V	G	V	Q	I	G	Y	H	E	A	F	S	H	R	I	M	G	G	A	D	V	I	L	V	P	S	R	F	E	P	C	G	L	T	Q	L	Y	G	L	K	Y	G
Query Conservation
Alig confidence																														.	.	.	.	.																	.	.	.										.	.	.	.
Template Conservation																														.	.	.	.	.																	.	.	.										.	.	.	.
Template Sequence		R	A	A	I	D	G	L	A	G	L	D	A	D	V	L	V	A	S	G	P	S	L	D	V	S	G	L	G	.	.	.	.	.	E	V	P	A	N	V	R	L	E	S	W	V	P	Q	A	A	.	.	.	L	L	P	H	V	D	L	V	V	.	.	.	.	H	H	G	G	S	G	T	T	L	G	A	L	G	A	G
Template Known Secondary structure										T	S	S	S							T	T	T				T	T			.	.	.	.	.				T	T					S							.	.	.		G	G	G		S				.	.	.	.		S												T	T
Template Predicted Secondary structure																														.	.	.	.	.																	.	.	.										.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		391	.	.	.	.	.	.	.	.	400					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure												.	.	.	.																												.	.
Query SS confidence												.	.	.	.																												.	.
Query Sequence		T	L	P	L	V	R	R	T	G	G	.	.	.	.	L	A	D	T	V	S	D	C	S	L	E	N	L	A	D	G	V	A	S	G	F	V	F	E	D	S	N	.	.	A	W	S	L	L	R	A	I	R	R	A	F	V	L	W	S	R	P	S	L	W	R	F	V	Q	R	Q	A	M	A	M	D	F	S	W	Q	V
Query Conservation												.	.	.	.																												.	.
Alig confidence												.	.	.	.									.	.	.	.	.	.	.	.	.											.	.																												.
Template Conservation																								.	.	.	.	.	.	.	.	.																																								.
Template Sequence		V	P	Q	L	S	F	P	W	A	G	D	S	F	A	N	A	Q	A	V	A	Q	A	.	.	.	.	.	.	.	.	.	G	A	G	D	H	L	L	P	D	N	I	S	P	D	S	V	S	G	A	A	K	R	L	L	A	E	E	S	Y	R	A	G	A	R	A	V	A	A	E	.	I	A	A	X	P	G	P	D	E
Template Known Secondary structure										S	T	T											T	.	.	.	.	.	.	.	.	.	T	S						G	G	G		S															T													.				S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330										.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	S	Y	R	E	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	R	L	L	P	G	F	A
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.