 |
Job Description | P0A6U8 | Confidence | 73.98% | Date | Thu Jan 5 11:03:56 GMT 2012 |
Rank | 223 | Aligned Residues | 38 |
% Identity | 16% | Template | c3lwbA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:d-alanine--d-alanine ligase; |
PDBTitle: crystal structure of apo d-alanine:d-alanine ligase (ddl) from2 mycobacterium tuberculosis
|
Resolution | 2.10 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | V | L | H | V | C | S | E | M | F | P | L | L | K | T | G | G | L | A | D | V | . |
I | G | A | L | P | A | A | Q | I | A | D | G | V | D | A | R | V | L | L | P | A | F | P | D |
Query Conservation |   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   | . |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
| . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
V | R | V | A | V | V | F | G | . |
. |
. |
. |
. |
. |
. |
. |
G | A | I | S | C | V | S | A | G | S | I | L | R | N | L | D | S | R | R | F | D | V | I | A | V | G | I | T | P | A | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |  |  |  |  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|